Variant report

Variant	rs7921331
Chromosome Location	chr10:97727916-97727917
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 31 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs10219061	0.94[EUR][1000 genomes]
rs10219085	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10509696	0.88[CEU][hapmap];0.81[EUR][1000 genomes]
rs10736095	0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10736096	0.96[CEU][hapmap];0.80[CHB][hapmap];0.95[JPT][hapmap];0.85[YRI][hapmap]
rs10786240	0.82[CHB][hapmap];0.84[JPT][hapmap]
rs10786245	0.81[ASN][1000 genomes]
rs10786249	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10786250	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10882686	0.82[CHB][hapmap];0.84[JPT][hapmap]
rs10882690	0.93[JPT][hapmap];0.81[ASN][1000 genomes]
rs11188526	0.96[ASN][1000 genomes]
rs1336458	0.90[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1360955	1.00[CEU][hapmap];0.94[CHB][hapmap];0.93[EUR][1000 genomes]
rs2027200	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs4254003	0.81[ASN][1000 genomes]
rs4303172	0.82[CHB][hapmap];0.94[JPT][hapmap];0.81[ASN][1000 genomes]
rs4415682	0.81[ASN][1000 genomes]
rs4917718	1.00[CEU][hapmap];0.94[CHB][hapmap];0.93[EUR][1000 genomes]
rs4918981	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4918982	0.88[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7893361	1.00[CEU][hapmap]
rs7903617	1.00[CEU][hapmap];0.94[CHB][hapmap];0.94[EUR][1000 genomes]
rs7904410	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[YRI][hapmap];0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7907620	0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7908420	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7908691	0.82[CHB][hapmap];0.94[JPT][hapmap]
rs7913576	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7913608	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9633701	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2761619	chr10:97719520-97746180	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs7921331	ENTPD1	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:97720800-97731400	Weak transcription	Left Ventricle	heart
2	chr10:97722800-97729200	Weak transcription	Aorta	Aorta
3	chr10:97725400-97735800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
4	chr10:97725400-97736200	Weak transcription	GM12878-XiMat	blood

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