Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10509697	0.90[JPT][hapmap];0.85[YRI][hapmap]
rs10736096	0.85[CEU][hapmap]
rs10786250	0.85[CEU][hapmap];0.89[TSI][hapmap]
rs11188530	0.86[CHB][hapmap];1.00[JPT][hapmap]
rs11819621	0.90[JPT][hapmap]
rs11819652	0.90[JPT][hapmap]
rs1336458	0.81[EUR][1000 genomes]
rs1360955	0.83[CEU][hapmap]
rs17111249	0.88[JPT][hapmap]
rs2027200	0.85[CEU][hapmap];0.89[TSI][hapmap]
rs2901895	0.90[JPT][hapmap]
rs4325250	0.85[CHB][hapmap];1.00[JPT][hapmap]
rs4391761	0.82[ASN][1000 genomes]
rs4917718	0.84[CEU][hapmap];0.84[TSI][hapmap]
rs57635810	0.90[AFR][1000 genomes]
rs61075650	0.98[ASN][1000 genomes]
rs7893361	0.88[CEU][hapmap]
rs7903617	0.84[CEU][hapmap]
rs7904410	0.85[CEU][hapmap];0.89[TSI][hapmap];0.81[EUR][1000 genomes]
rs7907476	0.90[JPT][hapmap]
rs7907620	0.81[EUR][1000 genomes]
rs7908420	0.88[CEU][hapmap];0.89[TSI][hapmap]
rs7909124	0.90[JPT][hapmap]
rs7912552	0.89[JPT][hapmap]
rs7921331	0.88[CEU][hapmap];0.81[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2761619	chr10:97719520-97746180	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs10509696	ENTPD1	Cis_1M	lymphoblastoid	RTeQTL
rs10509696	ENTPD1	cis	lymphoblastoid	seeQTL

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:97725400-97735800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
2	chr10:97725400-97736200	Weak transcription	GM12878-XiMat	blood
3	chr10:97733800-97734200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

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