Variant report

Variant	rs7963835
Chromosome Location	chr12:62637510-62637511
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs17125877	0.89[AFR][1000 genomes]
rs17125897	0.89[AFR][1000 genomes]
rs17125909	0.89[AFR][1000 genomes]
rs17126025	1.00[AFR][1000 genomes]
rs7134026	0.89[AFR][1000 genomes]
rs73315685	0.89[AFR][1000 genomes]
rs73315696	0.89[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1035150	chr12:62615347-62785005	Weak transcription Enhancers Strong transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	24 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:62635000-62638000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
2	chr12:62636800-62642600	Weak transcription	Hela-S3	cervix
3	chr12:62637200-62637600	Enhancers	K562	blood
4	chr12:62637400-62637800	Enhancers	Ovary	ovary

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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