The 2.0 version of rSNPBase

Variant report

Variant rs7973954
Chromosome Location chr12:49036483-49036484
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:49027600-49046600 Weak transcription Placenta Amnion Placenta Amnion
2 chr12:49027800-49036600 Weak transcription Fetal Brain Male brain
3 chr12:49028200-49045000 Weak transcription Colonic Mucosa Colon
4 chr12:49028400-49038000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
5 chr12:49028600-49037600 Weak transcription HSMM muscle
6 chr12:49030000-49047200 Weak transcription Esophagus oesophagus
7 chr12:49030200-49036800 Weak transcription A549 lung
8 chr12:49031000-49036600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr12:49031400-49037400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
10 chr12:49031400-49043800 Weak transcription Muscle Satellite Cultured Cells --
11 chr12:49031800-49037000 Weak transcription HSMMtube muscle
12 chr12:49032200-49036600 Weak transcription Adipose Nuclei Adipose
13 chr12:49033200-49036800 Weak transcription iPS-15b Cell Line embryonic stem cell
14 chr12:49033400-49036800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr12:49033600-49036600 Weak transcription Osteobl bone
16 chr12:49033800-49039000 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr12:49033800-49045200 Weak transcription Spleen Spleen
18 chr12:49034000-49036600 Weak transcription Duodenum Mucosa Duodenum
19 chr12:49034200-49036800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr12:49034400-49042400 Weak transcription Thymus Thymus
21 chr12:49034600-49036600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
22 chr12:49034600-49036800 ZNF genes & repeats Fetal Adrenal Gland Adrenal Gland
23 chr12:49034600-49045800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
24 chr12:49034800-49036800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr12:49034800-49036800 Weak transcription Breast Myoepithelial Primary Cells Breast
26 chr12:49034800-49036800 Weak transcription Primary T helper cells fromperipheralblood blood
27 chr12:49034800-49038000 Weak transcription Primary T cells from cord blood blood
28 chr12:49034800-49041200 Weak transcription Primary T regulatory cells fromperipheralblood blood
29 chr12:49034800-49041800 Weak transcription Sigmoid Colon Sigmoid Colon
30 chr12:49034800-49044400 Weak transcription NHEK skin
31 chr12:49034800-49045200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
32 chr12:49034800-49045400 Weak transcription NHDF-Ad bronchial
33 chr12:49035000-49036800 Weak transcription Skeletal Muscle Female skeletal muscle
34 chr12:49035000-49037000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr12:49035000-49041200 Weak transcription Stomach Smooth Muscle stomach
36 chr12:49035000-49044400 Weak transcription Brain Anterior Caudate brain
37 chr12:49035000-49045600 Weak transcription K562 blood
38 chr12:49035200-49036800 Weak transcription Liver Liver
39 chr12:49035200-49042200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr12:49035200-49046800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr12:49035400-49036600 Weak transcription Fetal Lung lung
42 chr12:49035400-49037400 ZNF genes & repeats H1 Cell Line embryonic stem cell
43 chr12:49035400-49044600 Weak transcription HMEC breast
44 chr12:49035400-49046200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
45 chr12:49035400-49047000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
46 chr12:49035400-49047000 Weak transcription Brain Inferior Temporal Lobe brain
47 chr12:49035600-49036600 Weak transcription Cortex derived primary cultured neurospheres brain
48 chr12:49035600-49038400 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
49 chr12:49035600-49042600 Weak transcription Duodenum Smooth Muscle Duodenum
50 chr12:49035800-49036800 Weak transcription Primary T cells fromperipheralblood blood

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Last update: Aug 31, 2015