Variant report

Variant	rs7990928
Chromosome Location	chr13:93095218-93095219
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs12859741	0.86[CHB][hapmap];0.81[JPT][hapmap]
rs16947580	1.00[CEU][hapmap]
rs16947594	0.86[CHB][hapmap];0.81[JPT][hapmap]
rs16952637	0.92[ASN][1000 genomes]
rs2149064	0.87[CHB][hapmap];0.83[JPT][hapmap]
rs2149065	0.86[CHB][hapmap];0.81[JPT][hapmap]
rs2209837	0.86[CHB][hapmap];0.81[JPT][hapmap]
rs2374012	0.92[CEU][hapmap]
rs4545664	0.82[CHB][hapmap];0.87[JPT][hapmap]
rs720801	0.86[CHB][hapmap];0.81[JPT][hapmap]
rs7320220	0.87[CHB][hapmap];0.82[JPT][hapmap]
rs7320711	0.86[CHB][hapmap];0.81[JPT][hapmap]
rs73632216	0.87[EUR][1000 genomes]
rs7989492	0.87[CHB][hapmap];0.82[JPT][hapmap]
rs7991465	0.93[ASN][1000 genomes]
rs7991869	0.87[CHB][hapmap];0.83[JPT][hapmap]
rs7994262	0.86[CHB][hapmap];0.81[JPT][hapmap]
rs8001555	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9561049	0.87[EUR][1000 genomes]
rs9561050	1.00[CEU][hapmap];0.87[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832680	chr13:93021114-93181489	Enhancers Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:93095200-93095600	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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