Variant report

Variant	rs7992791
Chromosome Location	chr13:92536982-92536983
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs1330471	0.93[CEU][hapmap];1.00[CHB][hapmap]
rs1536375	1.00[CHB][hapmap]
rs1854738	0.92[CEU][hapmap]
rs1972350	1.00[CHB][hapmap]
rs2352190	1.00[CHB][hapmap]
rs4630398	1.00[CHB][hapmap]
rs465219	1.00[CHB][hapmap]
rs6492565	1.00[CEU][hapmap];1.00[CHB][hapmap]
rs7988651	0.85[CEU][hapmap]
rs7990703	1.00[CHB][hapmap]
rs9523438	1.00[CHB][hapmap]
rs9523439	1.00[CHB][hapmap]
rs9523441	1.00[CHB][hapmap]
rs9556130	1.00[CEU][hapmap];0.87[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3378326	chr13:92445514-92816367	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv562721	chr13:92476602-92548841	Enhancers Weak transcription	lncRNA	n/a	inside rSNPs	diseases
3	nsv900883	chr13:92481236-92602622	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
4	nsv976142	chr13:92492782-92567759	Weak transcription Enhancers Flanking Active TSS Active TSS	lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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