Variant report

Variant	rs8014777
Chromosome Location	chr14:105876696-105876697
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:8)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:8 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr14:105876338..105883262-chr14:105952928..105958741,9	MCF-7	breast:
2	chr14:105876037..105879613-chr14:105913633..105916640,4	MCF-7	breast:
3	chr14:105863559..105868687-chr14:105874310..105880497,10	K562	blood:
4	chr14:105869640..105871793-chr14:105875645..105878408,2	K562	blood:
5	chr14:105876265..105878273-chr14:105941105..105944245,3	MCF-7	breast:
6	chr14:105875898..105878430-chr16:85494033..85496468,2	MCF-7	breast:
7	chr14:105851322..105853436-chr14:105876426..105879103,2	MCF-7	breast:
8	chr14:105856744..105858317-chr14:105876286..105878557,2	K562	blood:

No data

Variant related genes	Relation type
ENSG00000226174	Chromatin interaction
ENSG00000179364	Chromatin interaction
ENSG00000182979	Chromatin interaction
ENSG00000213145	Chromatin interaction
ENSG00000185347	Chromatin interaction
ENSG00000182809	Chromatin interaction
ENSG00000257341	Chromatin interaction

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10147154	1.00[ASN][1000 genomes]
rs11621365	0.82[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs12435295	0.84[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs28529463	1.00[ASN][1000 genomes]
rs28541433	1.00[ASN][1000 genomes]
rs4983613	0.86[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs4983614	1.00[ASN][1000 genomes]
rs6576085	0.95[AFR][1000 genomes];0.86[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs6576086	0.95[AFR][1000 genomes];0.86[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs6576087	0.85[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs6576088	0.88[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs7149988	0.82[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73361094	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530813	chr14:105607701-106453697	Strong transcription Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	149 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:29 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:105866400-105877400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr14:105866600-105877200	Weak transcription	Brain Cingulate Gyrus	brain
3	chr14:105866600-105877400	Weak transcription	Brain Angular Gyrus	brain
4	chr14:105866800-105877400	Weak transcription	Psoas Muscle	Psoas
5	chr14:105867000-105877200	Weak transcription	Pancreas	Pancrea
6	chr14:105867000-105877200	Weak transcription	Right Ventricle	heart
7	chr14:105867000-105877400	Weak transcription	Left Ventricle	heart
8	chr14:105867200-105877400	Weak transcription	HSMM	muscle
9	chr14:105867600-105876800	Weak transcription	Gastric	stomach
10	chr14:105867600-105877000	Weak transcription	Primary hematopoietic stem cells	blood
11	chr14:105867600-105877000	Weak transcription	Ovary	ovary
12	chr14:105867600-105877000	Weak transcription	Hela-S3	cervix
13	chr14:105867600-105877200	Weak transcription	Placenta Amnion	Placenta Amnion
14	chr14:105867600-105877400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
15	chr14:105867600-105877400	Weak transcription	Brain Inferior Temporal Lobe	brain
16	chr14:105867600-105877400	Weak transcription	HSMMtube	muscle
17	chr14:105867800-105876800	Weak transcription	Fetal Heart	heart
18	chr14:105868000-105876800	Weak transcription	Cortex derived primary cultured neurospheres	brain
19	chr14:105868400-105876800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
20	chr14:105871600-105877200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
21	chr14:105874200-105877000	Weak transcription	Muscle Satellite Cultured Cells	--
22	chr14:105875000-105876800	Enhancers	Primary monocytes fromperipheralblood	blood
23	chr14:105875600-105877200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
24	chr14:105875600-105877400	Weak transcription	Brain Anterior Caudate	brain
25	chr14:105875800-105877200	Weak transcription	Brain Hippocampus Middle	brain
26	chr14:105876200-105876800	Enhancers	Monocytes-CD14+_RO01746	blood
27	chr14:105876200-105877200	Weak transcription	Primary B cells from cord blood	blood
28	chr14:105876600-105877200	Weak transcription	Primary T helper cells fromperipheralblood	blood
29	chr14:105876600-105877200	Bivalent Enhancer	HepG2	liver

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