Variant report

Variant	rs8015876
Chromosome Location	chr14:69422865-69422866
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:69417161..69420849-chr14:69420995..69424800,5	MCF-7	breast:
2	chr14:69420750..69423419-chr14:69434981..69437135,2	K562	blood:
3	chr14:69382974..69384922-chr14:69421020..69423928,2	MCF-7	breast:

Extended variants
information (count: 26 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10083451	0.85[JPT][hapmap]
rs10139873	0.85[JPT][hapmap]
rs10145565	0.85[JPT][hapmap]
rs11158782	0.85[JPT][hapmap]
rs11158790	0.85[JPT][hapmap]
rs1147481	0.85[JPT][hapmap]
rs12432970	1.00[JPT][hapmap]
rs12434478	1.00[JPT][hapmap]
rs12589028	0.85[JPT][hapmap]
rs1275407	0.85[JPT][hapmap]
rs17093668	1.00[JPT][hapmap]
rs2001998	0.85[JPT][hapmap]
rs2024892	1.00[JPT][hapmap]
rs2024893	1.00[JPT][hapmap]
rs2268968	1.00[JPT][hapmap]
rs2268972	0.86[CHB][hapmap];0.81[LWK][hapmap]
rs2268973	0.86[CHB][hapmap];0.81[LWK][hapmap]
rs28613298	0.85[JPT][hapmap]
rs4902682	1.00[JPT][hapmap]
rs6573869	0.85[JPT][hapmap]
rs7140693	1.00[CHB][hapmap]
rs7146225	0.85[JPT][hapmap]
rs7160629	0.85[JPT][hapmap]
rs9323524	0.85[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832823	chr14:69388853-69567638	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
2	nsv564964	chr14:69392264-69423164	Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:117 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:69399000-69423200	Enhancers	Primary T helper cells PMA-I stimulated	--
2	chr14:69402000-69426200	Enhancers	Primary T cells fromperipheralblood	blood
3	chr14:69402200-69425200	Enhancers	Right Atrium	heart
4	chr14:69402400-69423600	Enhancers	Fetal Heart	heart
5	chr14:69402400-69427000	Genic enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
6	chr14:69409800-69434400	Enhancers	Primary T helper cells fromperipheralblood	blood
7	chr14:69411200-69442600	Weak transcription	Fetal Brain Female	brain
8	chr14:69413400-69423800	Enhancers	HUVEC	blood vessel
9	chr14:69414800-69428800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
10	chr14:69415200-69423400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
11	chr14:69416400-69423200	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
12	chr14:69417400-69429200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
13	chr14:69418200-69424400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
14	chr14:69418400-69424600	Weak transcription	Primary hematopoietic stem cells	blood
15	chr14:69418600-69424000	Weak transcription	H9 Cell Line	embryonic stem cell
16	chr14:69418800-69423400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
17	chr14:69418800-69424000	Weak transcription	Primary B cells from cord blood	blood
18	chr14:69419000-69423400	Enhancers	Primary neutrophils fromperipheralblood	blood
19	chr14:69419200-69423000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
20	chr14:69419800-69423600	Weak transcription	Monocytes-CD14+_RO01746	blood
21	chr14:69420200-69423400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
22	chr14:69420200-69424200	Weak transcription	GM12878-XiMat	blood
23	chr14:69420200-69428600	Weak transcription	Esophagus	oesophagus
24	chr14:69420200-69430800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
25	chr14:69420200-69437200	Genic enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
26	chr14:69420200-69441200	Genic enhancers	NHEK	skin
27	chr14:69420600-69441600	Genic enhancers	NH-A	brain
28	chr14:69420800-69427000	Genic enhancers	Muscle Satellite Cultured Cells	--
29	chr14:69421000-69424200	Enhancers	Small Intestine	intestine
30	chr14:69421000-69426000	Enhancers	Ovary	ovary
31	chr14:69421000-69432200	Enhancers	Primary T helper naive cells fromperipheralblood	blood
32	chr14:69421200-69426400	Enhancers	Skeletal Muscle Female	skeletal muscle
33	chr14:69421200-69426600	Genic enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
34	chr14:69421200-69442200	Genic enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
35	chr14:69421400-69423000	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
36	chr14:69421400-69423000	Enhancers	Brain Anterior Caudate	brain
37	chr14:69421400-69423200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
38	chr14:69421400-69423400	Flanking Active TSS	Stomach Smooth Muscle	stomach
39	chr14:69421400-69424000	Enhancers	Fetal Lung	lung
40	chr14:69421400-69424000	Enhancers	Fetal Muscle Leg	muscle
41	chr14:69421400-69424000	Enhancers	Gastric	stomach
42	chr14:69421400-69424200	Enhancers	Primary T helper naive cells from peripheral blood	blood
43	chr14:69421400-69425400	Enhancers	Right Ventricle	heart
44	chr14:69421400-69426000	Enhancers	Left Ventricle	heart
45	chr14:69421600-69423000	Enhancers	Brain Cingulate Gyrus	brain
46	chr14:69421600-69423000	Enhancers	Fetal Muscle Trunk	muscle
47	chr14:69421600-69423000	Enhancers	Psoas Muscle	Psoas
48	chr14:69421600-69423000	Flanking Active TSS	HepG2	liver
49	chr14:69421600-69423000	Enhancers	K562	blood
50	chr14:69421600-69423200	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin

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