Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs12101515	1.00[EUR][1000 genomes]
rs12102022	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12102026	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1589315	1.00[EUR][1000 genomes]
rs28369578	1.00[EUR][1000 genomes]
rs28414510	1.00[EUR][1000 genomes]
rs28440101	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28489023	0.88[AFR][1000 genomes]
rs28502057	1.00[EUR][1000 genomes]
rs28533229	1.00[EUR][1000 genomes]
rs28585621	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28649518	1.00[EUR][1000 genomes]
rs28650843	1.00[EUR][1000 genomes]
rs28662932	1.00[EUR][1000 genomes]
rs28837800	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28866807	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7167636	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7170707	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs8024574	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9920417	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv817539	chr15:54132584-55095235	Weak transcription Flanking Active TSS Enhancers Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
2	esv1845471	chr15:54556063-54685463	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:54654600-54664400	Weak transcription	Aorta	Aorta
2	chr15:54654600-54665600	Weak transcription	Fetal Lung	lung

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