Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs1090682	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1090683	0.85[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs327510	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs327511	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs327512	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs327516	0.88[AMR][1000 genomes];0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs327521	0.99[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs594141	0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs698406	0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs712697	0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs712698	0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs712699	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs712700	0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs712701	0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs712703	0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs712704	0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs806192	0.88[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs806193	0.84[EUR][1000 genomes]
rs806195	0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs806196	0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs806214	0.85[EUR][1000 genomes]
rs806215	0.85[EUR][1000 genomes]
rs806216	0.85[EUR][1000 genomes]
rs806218	0.89[EUR][1000 genomes]
rs806219	0.89[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831122	chr7:127143207-127357885	Active TSS Weak transcription Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:127232000-127245600	Weak transcription	Aorta	Aorta
2	chr7:127232200-127248200	Weak transcription	Spleen	Spleen
3	chr7:127233200-127244000	Weak transcription	Left Ventricle	heart
4	chr7:127241400-127248000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

Quick Search: