Variant report

Variant rs8109989
Chromosome Location chr19:56909654-56909655
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:93 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:56905000-56913600 ZNF genes & repeats Liver Liver
2 chr19:56905400-56910800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr19:56905400-56911000 Weak transcription Stomach Mucosa stomach
4 chr19:56905600-56910000 Weak transcription Fetal Brain Male brain
5 chr19:56905600-56910200 Weak transcription Fetal Kidney kidney
6 chr19:56905600-56914600 Weak transcription ES-WA7 Cell Line embryonic stem cell
7 chr19:56905800-56910000 Weak transcription iPS-15b Cell Line embryonic stem cell
8 chr19:56905800-56914400 Weak transcription Fetal Heart heart
9 chr19:56906000-56910200 Weak transcription iPS-18 Cell Line embryonic stem cell
10 chr19:56906000-56910200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr19:56906000-56910400 Weak transcription ES-I3 Cell Line embryonic stem cell
12 chr19:56907400-56910200 Weak transcription H9 Cell Line embryonic stem cell
13 chr19:56908000-56910400 Strong transcription Skeletal Muscle Male skeletal muscle
14 chr19:56908000-56910600 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr19:56908000-56913600 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
16 chr19:56908000-56913600 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
17 chr19:56908000-56914800 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr19:56908200-56910400 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
19 chr19:56908200-56911400 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
20 chr19:56908200-56912400 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
21 chr19:56908200-56913000 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
22 chr19:56908200-56914600 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr19:56908400-56910200 Strong transcription HSMMtube muscle
24 chr19:56908400-56911800 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
25 chr19:56908400-56912000 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr19:56908400-56912000 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
27 chr19:56908400-56913600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr19:56908600-56910000 Weak transcription Primary T helper naive cells from peripheral blood blood
29 chr19:56908600-56911000 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
30 chr19:56908600-56911600 ZNF genes & repeats Primary T helper naive cells fromperipheralblood blood
31 chr19:56908600-56912200 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
32 chr19:56908600-56913400 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
33 chr19:56908800-56910000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr19:56908800-56910600 Strong transcription Muscle Satellite Cultured Cells --
35 chr19:56908800-56911200 ZNF genes & repeats Primary neutrophils fromperipheralblood blood
36 chr19:56908800-56911200 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
37 chr19:56908800-56911400 ZNF genes & repeats Primary T cells from cord blood blood
38 chr19:56908800-56911600 ZNF genes & repeats Primary T helper 17 cells PMA-I stimulated --
39 chr19:56908800-56911600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr19:56908800-56911600 Strong transcription Brain Cingulate Gyrus brain
41 chr19:56908800-56911600 Strong transcription Brain Hippocampus Middle brain
42 chr19:56908800-56912000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
43 chr19:56908800-56912000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
44 chr19:56908800-56913600 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
45 chr19:56908800-56913600 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
46 chr19:56909000-56909800 ZNF genes & repeats Thymus Thymus
47 chr19:56909000-56910000 Strong transcription Primary T cells fromperipheralblood blood
48 chr19:56909000-56910600 ZNF genes & repeats Adipose Nuclei Adipose
49 chr19:56909000-56910600 ZNF genes & repeats Lung lung
50 chr19:56909000-56910800 Strong transcription H1 Cell Line embryonic stem cell

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