Variant report

Variant	rs8191093
Chromosome Location	chr16:82083654-82083655
allele	A/C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs16956334	1.00[AMR][1000 genomes]
rs1981880	1.00[AMR][1000 genomes]
rs4485360	1.00[AMR][1000 genomes]
rs72547421	1.00[AMR][1000 genomes]
rs8191075	1.00[AMR][1000 genomes]
rs8191110	1.00[AMR][1000 genomes]
rs8191118	1.00[AMR][1000 genomes]
rs8191132	1.00[AMR][1000 genomes]
rs8191143	1.00[AMR][1000 genomes]
rs8191216	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv907012	chr16:81986896-82115148	ZNF genes & repeats Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS Strong transcription Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
2	nsv1058368	chr16:82029516-82152788	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
3	nsv532598	chr16:82034475-82738733	Active TSS Enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	28 gene(s)	inside rSNPs	diseases
4	nsv532599	chr16:82074439-82926863	Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	27 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:82074200-82085600	Enhancers	HepG2	liver
2	chr16:82076600-82094800	Enhancers	Fetal Intestine Large	intestine
3	chr16:82077000-82083800	Weak transcription	Lung	lung
4	chr16:82079800-82084200	Weak transcription	Fetal Lung	lung
5	chr16:82080000-82089200	Enhancers	Liver	Liver
6	chr16:82080200-82086400	Enhancers	Rectal Mucosa Donor 31	rectum
7	chr16:82080800-82085600	Enhancers	Fetal Intestine Small	intestine
8	chr16:82081000-82083800	Enhancers	Duodenum Mucosa	Duodenum
9	chr16:82082400-82084400	Enhancers	Sigmoid Colon	Sigmoid Colon
10	chr16:82082400-82086600	Enhancers	Stomach Mucosa	stomach
11	chr16:82082600-82083800	Enhancers	Breast Myoepithelial Primary Cells	Breast
12	chr16:82082800-82083800	Enhancers	Small Intestine	intestine
13	chr16:82082800-82084000	Enhancers	Gastric	stomach
14	chr16:82083400-82084000	Enhancers	Colonic Mucosa	Colon
15	chr16:82083400-82084000	Enhancers	Placenta	Placenta
16	chr16:82083400-82084400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
17	chr16:82083400-82086800	Enhancers	Pancreas	Pancrea
18	chr16:82083600-82083800	Enhancers	Rectal Mucosa Donor 29	rectum

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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