Variant report

Variant	rs821438
Chromosome Location	chr6:11641800-11641801
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:11632264..11635404-chr6:11639257..11642520,3	K562	blood:
2	chr6:11636429..11639220-chr6:11640255..11642942,3	MCF-7	breast:

Extended variants
information (count: 23 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs1150575	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs1150576	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs1195534	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs1195535	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs12189559	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12203489	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12210415	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12213930	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs12663442	0.81[CEU][hapmap]
rs2104337	0.87[EUR][1000 genomes]
rs4713767	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4713768	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs501654	0.98[ASN][1000 genomes]
rs530313	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs821439	0.82[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9348937	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9348938	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9366851	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9366852	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs9368807	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9368808	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9380426	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9394208	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:11638400-11650000	Weak transcription	Muscle Satellite Cultured Cells	--
2	chr6:11639000-11642000	Enhancers	Fetal Stomach	stomach
3	chr6:11639000-11647400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr6:11639200-11641800	Weak transcription	Pancreas	Pancrea
5	chr6:11640000-11642000	Enhancers	HSMMtube	muscle
6	chr6:11640600-11646200	Weak transcription	Aorta	Aorta
7	chr6:11640800-11642000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
8	chr6:11640800-11650600	Weak transcription	Duodenum Smooth Muscle	Duodenum
9	chr6:11641000-11643200	Weak transcription	HSMM	muscle
10	chr6:11641600-11641800	Enhancers	Fetal Muscle Leg	muscle
11	chr6:11641600-11642000	Enhancers	NH-A	brain
12	chr6:11641800-11642000	Enhancers	Pancreas	Pancrea

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