Variant report

Variant	rs824074
Chromosome Location	chr3:135096627-135096628
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 43 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:43)

rs_ID	r²[population]
rs1069511	0.86[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1069512	0.84[EUR][1000 genomes]
rs1069513	0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1069514	0.84[EUR][1000 genomes]
rs1069515	0.82[EUR][1000 genomes]
rs1358238	0.84[ASN][1000 genomes]
rs1373816	0.83[ASN][1000 genomes]
rs1405488	0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1661460	0.86[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1661471	0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1664131	0.84[ASN][1000 genomes]
rs1725996	0.82[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs56220631	0.83[ASN][1000 genomes]
rs62271916	0.83[ASN][1000 genomes]
rs62271917	0.83[ASN][1000 genomes]
rs62295230	0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62295233	0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs711923	0.81[EUR][1000 genomes]
rs711924	0.86[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs711925	0.81[AFR][1000 genomes];0.86[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs711935	0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs711937	0.86[AFR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs711942	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs711956	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs711958	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs711959	0.86[EUR][1000 genomes]
rs711961	0.82[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs823953	0.83[EUR][1000 genomes]
rs823966	0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs823967	0.86[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs823969	0.86[EUR][1000 genomes]
rs823972	0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs823978	0.84[EUR][1000 genomes]
rs824086	0.91[AFR][1000 genomes];0.88[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs824088	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs824091	0.91[AFR][1000 genomes];0.88[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs824093	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs824099	0.80[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs824100	0.91[AFR][1000 genomes];0.85[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs844029	0.83[EUR][1000 genomes]
rs850699	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs941132	0.82[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs9837324	0.81[AMR][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:135069400-135104000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr3:135087800-135101800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr3:135088000-135101800	Weak transcription	H9 Cell Line	embryonic stem cell
4	chr3:135095800-135097000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
5	chr3:135096400-135096800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
6	chr3:135096400-135097200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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