Variant report

Variant	rs823972
Chromosome Location	chr3:135082183-135082184
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 35 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs1069511	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1069512	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs1069513	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1069514	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs1069515	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs1358238	0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1373816	0.83[ASN][1000 genomes]
rs1405488	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1661460	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1661471	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1664131	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1725996	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs56220631	0.83[ASN][1000 genomes]
rs62271916	0.83[ASN][1000 genomes]
rs62271917	0.83[ASN][1000 genomes]
rs62295230	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62295233	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs711923	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs711924	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs711925	0.95[AFR][1000 genomes];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs711935	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs711937	0.90[AFR][1000 genomes];0.98[AMR][1000 genomes];0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs711942	0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs711956	0.85[ASN][1000 genomes]
rs711958	0.85[ASN][1000 genomes]
rs711959	0.85[ASN][1000 genomes]
rs823953	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs823959	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs823966	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs823967	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs823969	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs824074	0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs824088	0.85[ASN][1000 genomes]
rs844024	0.80[AFR][1000 genomes];0.92[ASN][1000 genomes]
rs9837324	0.85[ASN][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:135069400-135104000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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