Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:135029338..135031400-chr3:135042744..135045543,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs1069511	0.82[ASN][1000 genomes]
rs1069513	0.82[ASN][1000 genomes]
rs1069514	0.82[ASN][1000 genomes]
rs1069515	0.82[ASN][1000 genomes]
rs1358238	0.92[ASN][1000 genomes]
rs1373816	0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1405488	0.80[AFR][1000 genomes];0.92[ASN][1000 genomes]
rs1661460	0.82[ASN][1000 genomes]
rs1661471	0.92[ASN][1000 genomes]
rs1664131	0.80[AFR][1000 genomes];0.92[ASN][1000 genomes]
rs1725996	0.80[AFR][1000 genomes];0.82[ASN][1000 genomes]
rs56220631	0.91[ASN][1000 genomes]
rs62271916	0.80[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs62271917	0.80[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs62295230	0.92[ASN][1000 genomes]
rs62295233	0.80[AFR][1000 genomes];0.92[ASN][1000 genomes]
rs711923	0.92[ASN][1000 genomes]
rs711924	0.82[ASN][1000 genomes]
rs711925	0.82[ASN][1000 genomes]
rs711935	0.80[AFR][1000 genomes];0.92[ASN][1000 genomes]
rs711937	0.82[ASN][1000 genomes]
rs823953	0.92[ASN][1000 genomes]
rs823959	0.92[ASN][1000 genomes]
rs823966	0.82[ASN][1000 genomes]
rs823967	0.82[ASN][1000 genomes]
rs823969	0.82[ASN][1000 genomes]
rs823972	0.80[AFR][1000 genomes];0.92[ASN][1000 genomes]

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs844024	DZIP1L	cis	parietal	SCAN
rs844024	ESYT3	cis	parietal	SCAN

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:135043000-135045000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
2	chr3:135044200-135044800	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
3	chr3:135044200-135045000	Bivalent Enhancer	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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