The 2.0 version of rSNPBase

Variant report

Variant rs857149
Chromosome Location chr1:57168804-57168805
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:57122800-57169600 Weak transcription Ovary ovary
2 chr1:57125600-57169800 Weak transcription Aorta Aorta
3 chr1:57144200-57171800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
4 chr1:57144400-57169400 Weak transcription Fetal Kidney kidney
5 chr1:57144400-57173600 Weak transcription Colon Smooth Muscle Colon
6 chr1:57154200-57174800 Weak transcription HUES48 Cell Line embryonic stem cell
7 chr1:57154400-57169000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr1:57154400-57174600 Weak transcription Brain Anterior Caudate brain
9 chr1:57154400-57174800 Weak transcription Gastric stomach
10 chr1:57154600-57169800 Weak transcription Fetal Intestine Large intestine
11 chr1:57158400-57169000 Weak transcription Hela-S3 cervix
12 chr1:57159600-57172800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr1:57159800-57174800 Weak transcription Fetal Stomach stomach
14 chr1:57160000-57174800 Weak transcription Brain Cingulate Gyrus brain
15 chr1:57160200-57174600 Weak transcription Fetal Brain Male brain
16 chr1:57160400-57174800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
17 chr1:57162600-57169400 Weak transcription Skeletal Muscle Female skeletal muscle
18 chr1:57162600-57169400 Weak transcription A549 lung
19 chr1:57162600-57174600 Weak transcription Brain Angular Gyrus brain
20 chr1:57162800-57176200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr1:57166200-57169400 Weak transcription Cortex derived primary cultured neurospheres brain
22 chr1:57166200-57169600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
23 chr1:57166200-57174800 Weak transcription H1 Cell Line embryonic stem cell
24 chr1:57166200-57178800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
25 chr1:57166400-57169000 Weak transcription ES-I3 Cell Line embryonic stem cell
26 chr1:57166400-57169200 Weak transcription iPS-20b Cell Line embryonic stem cell
27 chr1:57166400-57169400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
28 chr1:57166400-57169400 Weak transcription Brain Hippocampus Middle brain
29 chr1:57166400-57169600 Weak transcription Skeletal Muscle Male skeletal muscle
30 chr1:57166400-57171800 Weak transcription Fetal Muscle Leg muscle
31 chr1:57166600-57169000 Weak transcription HUES64 Cell Line embryonic stem cell
32 chr1:57166600-57169400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr1:57166600-57169400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr1:57166600-57169600 Weak transcription Brain Inferior Temporal Lobe brain
35 chr1:57166600-57169600 Weak transcription Fetal Brain Female brain
36 chr1:57166600-57169600 Weak transcription Left Ventricle heart
37 chr1:57166600-57169800 Weak transcription HepG2 liver
38 chr1:57166600-57171800 Weak transcription Fetal Muscle Trunk muscle
39 chr1:57166600-57175600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
40 chr1:57166600-57175600 Weak transcription Right Ventricle heart
41 chr1:57166800-57169400 Weak transcription Duodenum Smooth Muscle Duodenum
42 chr1:57166800-57169400 Weak transcription Fetal Intestine Small intestine
43 chr1:57166800-57170000 Weak transcription Fetal Heart heart
44 chr1:57167400-57169600 Weak transcription Pancreas Pancrea
45 chr1:57167800-57169400 Weak transcription Pancreatic Islets Pancreatic Islet
46 chr1:57168800-57169200 Weak transcription Stomach Smooth Muscle stomach

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Last update: Aug 31, 2015