Variant report
| Variant | rs857154 |
|---|---|
| Chromosome Location | chr1:57165812-57165813 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:57122800-57169600 | Weak transcription | Ovary | ovary |
| 2 | chr1:57125600-57169800 | Weak transcription | Aorta | Aorta |
| 3 | chr1:57144200-57171800 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 4 | chr1:57144400-57169400 | Weak transcription | Fetal Kidney | kidney |
| 5 | chr1:57144400-57173600 | Weak transcription | Colon Smooth Muscle | Colon |
| 6 | chr1:57149600-57166000 | Weak transcription | Right Ventricle | heart |
| 7 | chr1:57150600-57168000 | Weak transcription | Stomach Smooth Muscle | stomach |
| 8 | chr1:57154200-57174800 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 9 | chr1:57154400-57166000 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 10 | chr1:57154400-57169000 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 11 | chr1:57154400-57174600 | Weak transcription | Brain Anterior Caudate | brain |
| 12 | chr1:57154400-57174800 | Weak transcription | Gastric | stomach |
| 13 | chr1:57154600-57169800 | Weak transcription | Fetal Intestine Large | intestine |
| 14 | chr1:57154800-57166000 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 15 | chr1:57158400-57169000 | Weak transcription | Hela-S3 | cervix |
| 16 | chr1:57158800-57166000 | Weak transcription | Fetal Muscle Leg | muscle |
| 17 | chr1:57159000-57166000 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 18 | chr1:57159200-57166600 | Weak transcription | Brain Germinal Matrix | brain |
| 19 | chr1:57159600-57172800 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 20 | chr1:57159800-57174800 | Weak transcription | Fetal Stomach | stomach |
| 21 | chr1:57160000-57174800 | Weak transcription | Brain Cingulate Gyrus | brain |
| 22 | chr1:57160200-57174600 | Weak transcription | Fetal Brain Male | brain |
| 23 | chr1:57160400-57166000 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 24 | chr1:57160400-57174800 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 25 | chr1:57161400-57166000 | Weak transcription | Brain Hippocampus Middle | brain |
| 26 | chr1:57162600-57169400 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 27 | chr1:57162600-57169400 | Weak transcription | A549 | lung |
| 28 | chr1:57162600-57174600 | Weak transcription | Brain Angular Gyrus | brain |
| 29 | chr1:57162800-57176200 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 30 | chr1:57165000-57166400 | ZNF genes & repeats | Ganglion Eminence derived primary cultured neurospheres | brain |
| 31 | chr1:57165400-57166200 | ZNF genes & repeats | H9 Derived Neuron Cultured Cells | ES cell derived |
| 32 | chr1:57165400-57166400 | ZNF genes & repeats | iPS-20b Cell Line | embryonic stem cell |
| 33 | chr1:57165400-57166600 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 34 | chr1:57165400-57166600 | ZNF genes & repeats | HUES64 Cell Line | embryonic stem cell |
| 35 | chr1:57165400-57166600 | Strong transcription | HepG2 | liver |
| 36 | chr1:57165400-57166800 | Strong transcription | Fetal Heart | heart |
| 37 | chr1:57165600-57166000 | ZNF genes & repeats | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 38 | chr1:57165600-57166400 | Strong transcription | Skeletal Muscle Male | skeletal muscle |
| 39 | chr1:57165800-57166200 | ZNF genes & repeats | ES-UCSF4 Cell Line | embryonic stem cell |
| 40 | chr1:57165800-57166200 | ZNF genes & repeats | Pancreatic Islets | Pancreatic Islet |
| 41 | chr1:57165800-57166400 | ZNF genes & repeats | ES-I3 Cell Line | embryonic stem cell |
| 42 | chr1:57165800-57166600 | ZNF genes & repeats | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 43 | chr1:57165800-57166600 | ZNF genes & repeats | Fetal Muscle Trunk | muscle |
| 44 | chr1:57165800-57166600 | ZNF genes & repeats | Left Ventricle | heart |
