The 2.0 version of rSNPBase

Variant report

Variant rs882904
Chromosome Location chr11:72997910-72997911
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:72980400-72998400 Weak transcription Right Atrium heart
2 chr11:72984600-73000000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr11:72986200-72999800 Weak transcription Rectal Mucosa Donor 29 rectum
4 chr11:72992200-72998600 Weak transcription Primary B cells from cord blood blood
5 chr11:72992400-72998600 Weak transcription Pancreas Pancrea
6 chr11:72993600-72998200 Weak transcription Fetal Muscle Leg muscle
7 chr11:72993600-72998800 Weak transcription GM12878-XiMat blood
8 chr11:72994400-72998800 Enhancers Spleen Spleen
9 chr11:72994400-72999000 Weak transcription Duodenum Mucosa Duodenum
10 chr11:72994600-72998600 Weak transcription Colonic Mucosa Colon
11 chr11:72995000-72999600 Weak transcription NHEK skin
12 chr11:72995000-72999800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr11:72995200-72998400 Weak transcription Primary neutrophils fromperipheralblood blood
14 chr11:72995200-72998400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
15 chr11:72995200-72998600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
16 chr11:72995200-72999400 Weak transcription HMEC breast
17 chr11:72995200-72999600 Weak transcription Rectal Mucosa Donor 31 rectum
18 chr11:72995400-72998000 Weak transcription Skeletal Muscle Female skeletal muscle
19 chr11:72995400-72999400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr11:72995400-72999600 Weak transcription Stomach Smooth Muscle stomach
21 chr11:72995400-72999800 Weak transcription Esophagus oesophagus
22 chr11:72995600-72999600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr11:72995600-72999800 Weak transcription Breast Myoepithelial Primary Cells Breast
24 chr11:72996200-72998400 Enhancers Monocytes-CD14+_RO01746 blood
25 chr11:72996400-73001000 Enhancers Primary hematopoietic stem cells short term culture blood
26 chr11:72996600-72998400 Weak transcription Adipose Nuclei Adipose
27 chr11:72997000-73003400 Enhancers Fetal Intestine Large intestine
28 chr11:72997200-72998400 Weak transcription Fetal Muscle Trunk muscle
29 chr11:72997200-73001000 Genic enhancers Fetal Intestine Small intestine
30 chr11:72997400-72999800 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr11:72997600-72999400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr11:72997600-73000000 Enhancers Primary monocytes fromperipheralblood blood
33 chr11:72997600-73000200 Enhancers K562 blood
34 chr11:72997800-72998000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
35 chr11:72997800-72998000 Enhancers Right Ventricle heart
36 chr11:72997800-72998200 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr11:72997800-72998200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr11:72997800-72998200 Enhancers Placenta Placenta
39 chr11:72997800-72998200 Weak transcription Placenta Amnion Placenta Amnion
40 chr11:72997800-72999800 Enhancers A549 lung
41 chr11:72997800-73000200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr11:72997800-73000800 Enhancers Lung lung

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015