Variant report

Variant rs922359
Chromosome Location chr11:10478788-10478789
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:10473200-10512000 Weak transcription Aorta Aorta
2 chr11:10474200-10482800 Weak transcription Breast Myoepithelial Primary Cells Breast
3 chr11:10476200-10478800 Flanking Active TSS Brain Hippocampus Middle brain
4 chr11:10476400-10479000 Flanking Active TSS GM12878-XiMat blood
5 chr11:10476400-10481400 Flanking Active TSS Primary neutrophils fromperipheralblood blood
6 chr11:10476600-10479000 Flanking Active TSS Skeletal Muscle Male skeletal muscle
7 chr11:10476600-10479800 Flanking Active TSS Skeletal Muscle Female skeletal muscle
8 chr11:10476600-10481400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
9 chr11:10476800-10482600 Flanking Active TSS Primary B cells from cord blood blood
10 chr11:10477000-10479200 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
11 chr11:10477000-10479600 Flanking Active TSS Primary monocytes fromperipheralblood blood
12 chr11:10477000-10481000 Enhancers Sigmoid Colon Sigmoid Colon
13 chr11:10477000-10481400 Flanking Active TSS Dnd41 blood
14 chr11:10477000-10481600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
15 chr11:10477200-10478800 Flanking Active TSS Primary T cells fromperipheralblood blood
16 chr11:10477200-10478800 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
17 chr11:10477200-10479000 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
18 chr11:10477200-10479000 Flanking Active TSS Primary T helper cells fromperipheralblood blood
19 chr11:10477200-10479200 Flanking Active TSS Primary B cells from peripheral blood blood
20 chr11:10477200-10479200 Flanking Active TSS Primary hematopoietic stem cells blood
21 chr11:10477200-10479200 Flanking Active TSS Primary T helper cells PMA-I stimulated --
22 chr11:10477200-10479400 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
23 chr11:10477200-10479600 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
24 chr11:10477200-10479600 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
25 chr11:10477200-10479600 Flanking Active TSS Fetal Thymus thymus
26 chr11:10477200-10480600 Flanking Active TSS Primary T cells from cord blood blood
27 chr11:10477200-10481400 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
28 chr11:10477200-10481400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr11:10477400-10478800 Flanking Active TSS Primary Natural Killer cells fromperipheralblood blood
30 chr11:10477800-10479200 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr11:10477800-10489000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr11:10478000-10479000 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
33 chr11:10478000-10479200 Active TSS Duodenum Smooth Muscle Duodenum
34 chr11:10478000-10480600 Weak transcription Left Ventricle heart
35 chr11:10478000-10487400 Weak transcription HMEC breast
36 chr11:10478200-10478800 Flanking Active TSS Thymus Thymus
37 chr11:10478200-10478800 Enhancers HSMM muscle
38 chr11:10478200-10479600 Enhancers Brain Inferior Temporal Lobe brain
39 chr11:10478200-10480200 Weak transcription iPS-18 Cell Line embryonic stem cell
40 chr11:10478200-10480600 Weak transcription Fetal Heart heart
41 chr11:10478200-10481200 Active TSS Rectal Mucosa Donor 29 rectum
42 chr11:10478200-10482600 Weak transcription Stomach Mucosa stomach
43 chr11:10478200-10482600 Weak transcription HSMMtube muscle
44 chr11:10478200-10483200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr11:10478200-10485800 Weak transcription H9 Cell Line embryonic stem cell
46 chr11:10478400-10478800 Enhancers Muscle Satellite Cultured Cells --
47 chr11:10478400-10478800 Active TSS Brain Anterior Caudate brain
48 chr11:10478400-10478800 Enhancers Brain Substantia Nigra brain
49 chr11:10478400-10478800 Enhancers Fetal Adrenal Gland Adrenal Gland
50 chr11:10478400-10479000 Enhancers Fetal Muscle Leg muscle

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