Variant report

Variant rs926385
Chromosome Location chr1:209758732-209758733
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:209756800-209759200 Active TSS Brain Inferior Temporal Lobe brain
2 chr1:209756800-209759400 Active TSS Brain Dorsolateral Prefrontal Cortex brain
3 chr1:209756800-209759600 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr1:209757000-209759400 Active TSS Brain Angular Gyrus brain
5 chr1:209757000-209760000 Enhancers Placenta Amnion Placenta Amnion
6 chr1:209757200-209759800 Enhancers Fetal Heart heart
7 chr1:209757600-209758800 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
8 chr1:209757600-209758800 Enhancers Cortex derived primary cultured neurospheres brain
9 chr1:209757600-209759000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
10 chr1:209757800-209758800 Bivalent Enhancer iPS-18 Cell Line embryonic stem cell
11 chr1:209757800-209758800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
12 chr1:209757800-209759600 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr1:209757800-209759800 Bivalent Enhancer Fetal Stomach stomach
14 chr1:209758000-209758800 Flanking Active TSS Pancreatic Islets Pancreatic Islet
15 chr1:209758000-209759000 Bivalent Enhancer hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr1:209758000-209759000 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
17 chr1:209758000-209760000 Enhancers Fetal Kidney kidney
18 chr1:209758200-209758800 Active TSS Fetal Brain Male brain
19 chr1:209758200-209759000 Flanking Active TSS Fetal Brain Female brain
20 chr1:209758200-209759600 Enhancers Ovary ovary
21 chr1:209758200-209763200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr1:209758400-209758800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr1:209758400-209758800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr1:209758400-209758800 Bivalent Enhancer Brain Germinal Matrix brain
25 chr1:209758400-209758800 Bivalent Enhancer NHEK skin
26 chr1:209758400-209758800 Enhancers NHLF lung
27 chr1:209758400-209759200 Bivalent/Poised TSS Brain Cingulate Gyrus brain
28 chr1:209758600-209758800 Bivalent Enhancer HUES6 Cell Line embryonic stem cell
29 chr1:209758600-209758800 Flanking Bivalent TSS/Enh iPS-15b Cell Line embryonic stem cell
30 chr1:209758600-209758800 Bivalent Enhancer Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr1:209758600-209758800 Bivalent/Poised TSS Brain Hippocampus Middle brain
32 chr1:209758600-209758800 Bivalent Enhancer Duodenum Mucosa Duodenum
33 chr1:209758600-209759000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr1:209758600-209759000 Bivalent Enhancer Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr1:209758600-209759000 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr1:209758600-209759000 Flanking Bivalent TSS/Enh Brain Anterior Caudate brain
37 chr1:209758600-209759000 Flanking Active TSS Fetal Lung lung
38 chr1:209758600-209759000 Enhancers Right Atrium heart
39 chr1:209758600-209759000 Enhancers HMEC breast
40 chr1:209758600-209759000 Bivalent Enhancer NHDF-Ad bronchial
41 chr1:209758600-209759200 Bivalent Enhancer IMR90 fetal lung fibroblasts Cell Line lung
42 chr1:209758600-209759200 Bivalent Enhancer Primary T helper cells fromperipheralblood blood
43 chr1:209758600-209759400 Bivalent Enhancer ES-WA7 Cell Line embryonic stem cell
44 chr1:209758600-209759400 Bivalent Enhancer Fetal Intestine Small intestine
45 chr1:209758600-209759400 Bivalent Enhancer Rectal Mucosa Donor 29 rectum
46 chr1:209758600-209759400 Flanking Bivalent TSS/Enh Stomach Smooth Muscle stomach
47 chr1:209758600-209759600 Enhancers Breast Myoepithelial Primary Cells Breast
48 chr1:209758600-209759600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr1:209758600-209759600 Bivalent Enhancer Duodenum Smooth Muscle Duodenum
50 chr1:209758600-209759600 Enhancers Esophagus oesophagus

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