Variant report
Variant | rs9288106 |
---|---|
Chromosome Location | chr2:185529665-185529666 |
allele | A/C/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs1014959 | 0.89[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs10197925 | 1.00[JPT][hapmap] |
rs10198049 | 1.00[JPT][hapmap] |
rs1021043 | 1.00[JPT][hapmap] |
rs11890128 | 0.82[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs11891662 | 1.00[CEU][hapmap];0.91[CHB][hapmap];1.00[JPT][hapmap] |
rs11900132 | 0.91[CHB][hapmap];1.00[JPT][hapmap];0.87[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs12693384 | 1.00[JPT][hapmap] |
rs12693385 | 1.00[JPT][hapmap] |
rs13026742 | 0.86[JPT][hapmap] |
rs13393273 | 1.00[JPT][hapmap] |
rs1427150 | 0.95[CEU][hapmap];0.91[CHB][hapmap];1.00[JPT][hapmap] |
rs1480478 | 1.00[JPT][hapmap] |
rs16826057 | 0.83[EUR][1000 genomes] |
rs17430600 | 0.82[JPT][hapmap] |
rs17508595 | 0.95[CEU][hapmap];0.91[CHB][hapmap];1.00[JPT][hapmap] |
rs2052794 | 0.81[EUR][1000 genomes] |
rs2054548 | 1.00[JPT][hapmap] |
rs2369595 | 0.85[JPT][hapmap] |
rs359882 | 1.00[JPT][hapmap] |
rs359884 | 1.00[JPT][hapmap] |
rs359885 | 1.00[JPT][hapmap] |
rs359886 | 1.00[JPT][hapmap] |
rs359892 | 1.00[JPT][hapmap] |
rs4366862 | 0.83[EUR][1000 genomes] |
rs55782979 | 0.81[ASN][1000 genomes] |
rs60269985 | 0.87[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs6434095 | 1.00[JPT][hapmap] |
rs6434096 | 1.00[JPT][hapmap] |
rs6728764 | 0.85[JPT][hapmap] |
rs73041376 | 0.83[EUR][1000 genomes] |
rs73041394 | 0.90[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs73043234 | 0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs73043238 | 0.90[EUR][1000 genomes] |
rs7608194 | 0.86[JPT][hapmap] |
rs7608284 | 1.00[JPT][hapmap] |
rs899847 | 1.00[JPT][hapmap] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv532412 | chr2:185347334-186108701 | ZNF genes & repeats Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Bivalent Enhancer Strong transcription Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 23 gene(s) | inside rSNPs | diseases |
No data |