Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:112831326..112834195-chr3:112837438..112839554,2	K562	blood:

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10934217	0.81[AFR][1000 genomes]
rs12486305	1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap]
rs1632500	0.95[AFR][1000 genomes];0.94[AMR][1000 genomes]
rs1795169	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1795174	0.95[AFR][1000 genomes];0.94[AMR][1000 genomes]
rs1797616	0.91[AFR][1000 genomes];0.94[AMR][1000 genomes]
rs1797617	0.92[AFR][1000 genomes];0.92[AMR][1000 genomes]
rs2613921	0.81[AFR][1000 genomes]
rs2613922	0.81[AFR][1000 genomes]
rs2613951	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs2613954	0.84[AFR][1000 genomes];0.82[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2700199	0.94[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2700202	0.81[AFR][1000 genomes]
rs2700209	0.95[AFR][1000 genomes];0.94[AMR][1000 genomes]
rs2700210	0.95[AFR][1000 genomes];0.94[AMR][1000 genomes]
rs2700215	0.95[AFR][1000 genomes];0.94[AMR][1000 genomes]
rs2700216	0.95[AFR][1000 genomes];0.94[AMR][1000 genomes]
rs2951464	0.95[AFR][1000 genomes];0.94[AMR][1000 genomes]
rs3101349	0.92[AFR][1000 genomes];0.94[AMR][1000 genomes]
rs34302044	0.86[ASN][1000 genomes]
rs35097816	0.86[ASN][1000 genomes]
rs35728677	0.86[ASN][1000 genomes]
rs35840548	0.86[ASN][1000 genomes]
rs36107112	0.86[ASN][1000 genomes]
rs58152322	0.86[ASN][1000 genomes]
rs73221996	0.86[ASN][1000 genomes]
rs7632483	0.81[AFR][1000 genomes]
rs7650532	0.81[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3431441	chr3:112453467-113213252	Active TSS Flanking Active TSS Weak transcription Strong transcription ZNF genes & repeats Bivalent Enhancer Enhancers Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
2	nsv877344	chr3:112789865-112854339	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv877345	chr3:112826253-112848851	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
4	nsv522974	chr3:112832063-112836389	Flanking Active TSS Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:112828200-112836200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
2	chr3:112830000-112835200	Weak transcription	Fetal Muscle Trunk	muscle
3	chr3:112830200-112835800	Weak transcription	Fetal Stomach	stomach
4	chr3:112830800-112836200	Weak transcription	NHEK	skin
5	chr3:112831200-112836000	Weak transcription	Hela-S3	cervix
6	chr3:112833400-112836200	Weak transcription	Cortex derived primary cultured neurospheres	brain

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