Variant report

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs1041657	0.81[YRI][hapmap]
rs10943198	0.85[ASN][1000 genomes]
rs1167368	0.84[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1167369	0.83[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1167371	0.81[YRI][hapmap]
rs2785676	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2785684	0.82[YRI][hapmap]
rs480240	0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs487576	0.83[AMR][1000 genomes]
rs492212	0.83[AMR][1000 genomes]
rs512429	0.83[AMR][1000 genomes]
rs523610	0.83[ASN][1000 genomes]
rs545353	0.81[AMR][1000 genomes]
rs554312	0.81[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs57589995	0.83[AMR][1000 genomes]
rs6902731	0.85[ASN][1000 genomes]
rs6904232	0.84[ASN][1000 genomes]
rs6909286	0.84[ASN][1000 genomes]
rs6909742	0.84[ASN][1000 genomes]
rs6921818	0.85[ASN][1000 genomes]
rs6925784	0.90[ASN][1000 genomes]
rs6925863	0.85[ASN][1000 genomes]
rs7775638	0.82[ASN][1000 genomes]
rs9341478	0.80[ASN][1000 genomes]
rs9341484	0.85[ASN][1000 genomes]
rs9343190	0.85[ASN][1000 genomes]
rs9350561	0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3337652	chr6:75191281-75236324	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a
2	nsv520746	chr6:75211546-75691814	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:75228600-75229400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
2	chr6:75228600-75229600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
3	chr6:75228800-75229400	Enhancers	Muscle Satellite Cultured Cells	--

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