The 2.0 version of rSNPBase

Variant report

Variant rs9307060
Chromosome Location chr4:89913550-89913551
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:89878400-89927600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
2 chr4:89882400-89916400 Weak transcription Primary hematopoietic stem cells short term culture blood
3 chr4:89894000-89922200 Weak transcription Fetal Kidney kidney
4 chr4:89895200-89915400 Weak transcription Fetal Muscle Leg muscle
5 chr4:89896800-89934800 Weak transcription HUES48 Cell Line embryonic stem cell
6 chr4:89898600-89914000 Weak transcription Duodenum Mucosa Duodenum
7 chr4:89903000-89957200 Weak transcription HSMM muscle
8 chr4:89903400-89936000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr4:89904200-89918200 Weak transcription Fetal Intestine Large intestine
10 chr4:89904200-89927600 Weak transcription Pancreas Pancrea
11 chr4:89906600-89927400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr4:89907800-89927400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
13 chr4:89908400-89926600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
14 chr4:89908800-89927400 Weak transcription Fetal Muscle Trunk muscle
15 chr4:89909400-89926400 Weak transcription iPS-20b Cell Line embryonic stem cell
16 chr4:89909800-89931200 Weak transcription iPS-18 Cell Line embryonic stem cell
17 chr4:89910400-89927600 Weak transcription Ovary ovary
18 chr4:89910600-89918800 Weak transcription Fetal Adrenal Gland Adrenal Gland
19 chr4:89910800-89915000 Weak transcription Fetal Intestine Small intestine
20 chr4:89910800-89922000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
21 chr4:89910800-89923400 Weak transcription Fetal Stomach stomach
22 chr4:89911400-89930400 Weak transcription Primary hematopoietic stem cells blood
23 chr4:89911600-89915200 Weak transcription Breast Myoepithelial Primary Cells Breast
24 chr4:89911600-89926400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr4:89911600-89926600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr4:89912000-89914600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr4:89912200-89918800 Weak transcription Fetal Lung lung
28 chr4:89912200-89921600 Weak transcription Fetal Brain Male brain
29 chr4:89912200-89926200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
30 chr4:89912200-89926400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr4:89912200-89935800 Weak transcription ES-I3 Cell Line embryonic stem cell
32 chr4:89912200-89943800 Weak transcription Psoas Muscle Psoas
33 chr4:89912400-89913600 Enhancers HUVEC blood vessel
34 chr4:89912400-89914000 Weak transcription Fetal Heart heart
35 chr4:89912400-89923200 Weak transcription HUES64 Cell Line embryonic stem cell
36 chr4:89912400-89927600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr4:89912800-89913600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
38 chr4:89912800-89922200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
39 chr4:89913000-89913800 Enhancers Placenta Placenta
40 chr4:89913400-89921600 Weak transcription K562 blood
41 chr4:89913400-89921800 Weak transcription A549 lung
42 chr4:89913400-89922000 Weak transcription Small Intestine intestine
43 chr4:89913400-89923400 Weak transcription HUES6 Cell Line embryonic stem cell
44 chr4:89913400-89930800 Weak transcription Sigmoid Colon Sigmoid Colon
45 chr4:89913400-89944000 Weak transcription Gastric stomach

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Last update: Aug 31, 2015