Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	4:118667424-118683756..4:118706981-118715929	Hela-S3	cervix:
2	4:118454469-118464115..4:118706981-118715929	H1-hESC	embryonic stem cell:	embryo
3	4:118706981-118715929..4:118722741-118723956	H1-hESC	embryonic stem cell:	embryo
4	4:118559839-118566258..4:118706981-118715929	Hela-S3	cervix:
5	4:118414019-118416561..4:118706981-118715929	Hela-S3	cervix:

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs1023892	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11945758	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12640843	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12646271	0.82[CEU][hapmap];0.91[CHB][hapmap];0.86[JPT][hapmap];0.80[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs12647615	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12650944	0.93[AFR][1000 genomes]
rs17863003	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs17867558	0.93[AFR][1000 genomes]
rs1903180	0.92[AMR][1000 genomes];0.83[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2125709	0.90[AFR][1000 genomes]
rs2169059	0.90[AFR][1000 genomes]
rs2169060	0.93[AFR][1000 genomes]
rs4377657	0.97[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4429786	0.83[CEU][hapmap];0.91[CHB][hapmap];0.87[JPT][hapmap]
rs4461585	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4569817	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4574479	0.97[AMR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6819399	0.80[EUR][1000 genomes]
rs7666568	0.97[AFR][1000 genomes]
rs7686336	0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7687404	0.86[AFR][1000 genomes]
rs9307444	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv879838	chr4:118681261-118753062	Enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:118705600-118714800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
2	chr4:118711000-118711800	Enhancers	ES-I3 Cell Line	embryonic stem cell
3	chr4:118711200-118712000	Enhancers	HUES6 Cell Line	embryonic stem cell
4	chr4:118711200-118712000	Enhancers	iPS-15b Cell Line	embryonic stem cell

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