Variant report

Variant	rs4429786
Chromosome Location	chr4:118752073-118752074
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10006167	0.82[EUR][1000 genomes]
rs1023892	0.90[AMR][1000 genomes];0.80[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12640486	0.82[EUR][1000 genomes]
rs12640843	0.89[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs12646271	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12647615	0.86[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs17863003	0.83[AMR][1000 genomes]
rs1903180	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4353970	0.89[YRI][hapmap]
rs4377657	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4392571	0.82[EUR][1000 genomes]
rs4461585	0.90[AMR][1000 genomes];0.80[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4569817	0.90[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs4574479	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4833553	0.82[EUR][1000 genomes]
rs6819399	0.82[EUR][1000 genomes]
rs7686336	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9307443	0.84[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs9307444	0.85[AMR][1000 genomes];0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv879838	chr4:118681261-118753062	Enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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