Variant report
Variant | rs9310531 |
---|---|
Chromosome Location | chr3:17811089-17811090 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:2)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:2 , 50 per page) page:
1
No data |
No data |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000131374 | Chromatin interaction |
rs_ID | r2[population] |
---|---|
rs13317343 | 1.00[YRI][hapmap] |
rs3922900 | 1.00[AFR][1000 genomes] |
rs6800330 | 1.00[YRI][hapmap] |
rs9825932 | 1.00[YRI][hapmap] |
rs9833117 | 1.00[YRI][hapmap] |
rs9833234 | 1.00[YRI][hapmap] |
rs9837459 | 1.00[YRI][hapmap];1.00[AFR][1000 genomes] |
rs9851997 | 1.00[AFR][1000 genomes] |
rs9861797 | 1.00[AFR][1000 genomes] |
rs9877829 | 1.00[YRI][hapmap];1.00[AFR][1000 genomes] |
rs9882280 | 1.00[YRI][hapmap] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv999594 | chr3:17690416-17982318 | Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 10 gene(s) | inside rSNPs | diseases |
No data |