The 2.0 version of rSNPBase

Variant report

Variant rs932692
Chromosome Location chr1:86852849-86852850
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:86815200-86860200 Weak transcription Fetal Brain Male brain
2 chr1:86820200-86854400 Weak transcription Primary T killer naive cells fromperipheralblood blood
3 chr1:86820200-86854800 Weak transcription HSMMtube muscle
4 chr1:86820400-86860200 Weak transcription NHEK skin
5 chr1:86836600-86860800 Weak transcription Aorta Aorta
6 chr1:86840600-86859600 Weak transcription Rectal Mucosa Donor 29 rectum
7 chr1:86841000-86854400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
8 chr1:86841000-86859800 Weak transcription HSMM muscle
9 chr1:86841600-86859800 Weak transcription Breast Myoepithelial Primary Cells Breast
10 chr1:86841800-86855000 Weak transcription Primary T cells fromperipheralblood blood
11 chr1:86843400-86855000 Weak transcription Brain Cingulate Gyrus brain
12 chr1:86843400-86860800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
13 chr1:86843600-86858600 Weak transcription Brain Hippocampus Middle brain
14 chr1:86843600-86859200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
15 chr1:86843600-86860600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr1:86843600-86860800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr1:86843800-86854000 Weak transcription Primary T regulatory cells fromperipheralblood blood
18 chr1:86844600-86853400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
19 chr1:86844800-86855000 Weak transcription Thymus Thymus
20 chr1:86844800-86859200 Weak transcription Brain Germinal Matrix brain
21 chr1:86844800-86861000 Weak transcription Fetal Intestine Small intestine
22 chr1:86845000-86853800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr1:86845000-86855000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
24 chr1:86845000-86859200 Weak transcription NH-A brain
25 chr1:86845000-86859400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
26 chr1:86845000-86860200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr1:86845000-86860600 Weak transcription Fetal Thymus thymus
28 chr1:86845000-86860800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
29 chr1:86845200-86859400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr1:86846600-86860400 Weak transcription HUES48 Cell Line embryonic stem cell
31 chr1:86846800-86853600 Weak transcription Muscle Satellite Cultured Cells --
32 chr1:86848800-86861000 Weak transcription Primary B cells from cord blood blood
33 chr1:86849000-86858600 Weak transcription NHDF-Ad bronchial
34 chr1:86849200-86853400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr1:86849200-86853800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr1:86849200-86854600 Weak transcription GM12878-XiMat blood
37 chr1:86849200-86855000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr1:86849200-86860200 Weak transcription Primary hematopoietic stem cells short term culture blood
39 chr1:86849200-86860800 Weak transcription Primary hematopoietic stem cells blood
40 chr1:86849400-86853400 Weak transcription Primary T helper naive cells from peripheral blood blood
41 chr1:86849400-86853400 Weak transcription Primary T helper naive cells fromperipheralblood blood
42 chr1:86849400-86853600 Weak transcription Osteobl bone
43 chr1:86849400-86854000 Weak transcription Adipose Nuclei Adipose
44 chr1:86849400-86855000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr1:86849600-86853800 Weak transcription Primary T helper cells PMA-I stimulated --
46 chr1:86849600-86854200 Weak transcription Primary T killer memory cells from peripheral blood blood
47 chr1:86849800-86853200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
48 chr1:86849800-86854000 Weak transcription Primary T cells from cord blood blood
49 chr1:86849800-86854600 Weak transcription HUVEC blood vessel
50 chr1:86849800-86854800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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Last update: Aug 31, 2015