Variant report

Variant	rs9332179
Chromosome Location	chr10:96735730-96735731
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 112 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:108)

rs_ID	r²[population]
rs10509681	1.00[ASN][1000 genomes]
rs11188124	1.00[ASN][1000 genomes]
rs11188148	1.00[ASN][1000 genomes]
rs11188153	1.00[ASN][1000 genomes]
rs11188154	1.00[ASN][1000 genomes]
rs11572064	1.00[ASN][1000 genomes]
rs11572080	1.00[ASN][1000 genomes]
rs11572082	1.00[ASN][1000 genomes]
rs11572094	1.00[ASN][1000 genomes]
rs11572107	1.00[ASN][1000 genomes]
rs11572116	1.00[ASN][1000 genomes]
rs11572128	1.00[ASN][1000 genomes]
rs11572150	1.00[ASN][1000 genomes]
rs11572168	1.00[ASN][1000 genomes]
rs11572169	1.00[ASN][1000 genomes]
rs11572174	1.00[ASN][1000 genomes]
rs11591385	1.00[ASN][1000 genomes]
rs11592225	1.00[ASN][1000 genomes]
rs11593816	1.00[ASN][1000 genomes]
rs11596254	1.00[ASN][1000 genomes]
rs11596290	1.00[ASN][1000 genomes]
rs11596296	1.00[ASN][1000 genomes]
rs11596943	1.00[ASN][1000 genomes]
rs11598823	1.00[ASN][1000 genomes]
rs11599203	1.00[ASN][1000 genomes]
rs11599738	1.00[ASN][1000 genomes]
rs12762602	1.00[ASN][1000 genomes]
rs12763201	1.00[ASN][1000 genomes]
rs12774244	1.00[ASN][1000 genomes]
rs12780333	1.00[ASN][1000 genomes]
rs17442862	1.00[ASN][1000 genomes]
rs17443251	1.00[ASN][1000 genomes]
rs17523627	1.00[ASN][1000 genomes]
rs1799853	1.00[ASN][1000 genomes]
rs1934954	1.00[ASN][1000 genomes]
rs1934966	1.00[ASN][1000 genomes]
rs2153629	1.00[ASN][1000 genomes]
rs2185570	1.00[ASN][1000 genomes]
rs2757483	1.00[ASN][1000 genomes]
rs2860968	1.00[ASN][1000 genomes]
rs34254643	1.00[ASN][1000 genomes]
rs34320910	1.00[ASN][1000 genomes]
rs34949438	1.00[ASN][1000 genomes]
rs35238981	1.00[ASN][1000 genomes]
rs35883122	1.00[ASN][1000 genomes]
rs35998772	1.00[ASN][1000 genomes]
rs36168663	1.00[ASN][1000 genomes]
rs3980257	1.00[ASN][1000 genomes]
rs41291560	1.00[ASN][1000 genomes]
rs4351748	1.00[ASN][1000 genomes]
rs4607998	1.00[ASN][1000 genomes]
rs4917636	1.00[ASN][1000 genomes]
rs4918704	1.00[ASN][1000 genomes]
rs4918705	1.00[ASN][1000 genomes]
rs4918710	1.00[ASN][1000 genomes]
rs4918716	1.00[ASN][1000 genomes]
rs4918746	1.00[ASN][1000 genomes]
rs4918795	1.00[ASN][1000 genomes]
rs55727865	1.00[ASN][1000 genomes]
rs55753924	1.00[ASN][1000 genomes]
rs56028148	1.00[ASN][1000 genomes]
rs56044736	1.00[ASN][1000 genomes]
rs56090603	1.00[ASN][1000 genomes]
rs56380192	1.00[ASN][1000 genomes]
rs56386142	1.00[ASN][1000 genomes]
rs56408997	1.00[ASN][1000 genomes]
rs61886257	1.00[ASN][1000 genomes]
rs61886771	1.00[ASN][1000 genomes]
rs61886773	1.00[ASN][1000 genomes]
rs61886796	1.00[ASN][1000 genomes]
rs61886797	1.00[ASN][1000 genomes]
rs61886802	1.00[ASN][1000 genomes]
rs61888362	1.00[ASN][1000 genomes]
rs61888394	1.00[ASN][1000 genomes]
rs61888396	1.00[ASN][1000 genomes]
rs61888402	1.00[ASN][1000 genomes]
rs61888408	1.00[ASN][1000 genomes]
rs61888409	1.00[ASN][1000 genomes]
rs61888410	1.00[ASN][1000 genomes]
rs61888411	1.00[ASN][1000 genomes]
rs659309	1.00[ASN][1000 genomes]
rs66648066	1.00[ASN][1000 genomes]
rs670565	1.00[ASN][1000 genomes]
rs67851687	1.00[ASN][1000 genomes]
rs67918795	1.00[ASN][1000 genomes]
rs7082506	1.00[ASN][1000 genomes]
rs71482344	1.00[ASN][1000 genomes]
rs72816690	1.00[ASN][1000 genomes]
rs72816698	1.00[ASN][1000 genomes]
rs72816700	1.00[ASN][1000 genomes]
rs72816701	1.00[ASN][1000 genomes]
rs72818612	1.00[ASN][1000 genomes]
rs72818618	1.00[ASN][1000 genomes]
rs72818651	1.00[ASN][1000 genomes]
rs72818652	1.00[ASN][1000 genomes]
rs72818673	1.00[ASN][1000 genomes]
rs72818680	1.00[ASN][1000 genomes]
rs72818681	1.00[ASN][1000 genomes]
rs72820645	1.00[ASN][1000 genomes]
rs9332100	1.00[ASN][1000 genomes]
rs9332101	1.00[ASN][1000 genomes]
rs9332102	1.00[ASN][1000 genomes]
rs9332119	1.00[ASN][1000 genomes]
rs9332155	1.00[ASN][1000 genomes]
rs9332163	1.00[ASN][1000 genomes]
rs9332216	1.00[ASN][1000 genomes]
rs9332222	1.00[ASN][1000 genomes]
rs9332242	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv497859	chr10:96058024-97027747	Strong transcription Weak transcription Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	41 gene(s)	inside rSNPs	diseases
2	nsv1035409	chr10:96495177-96832057	Flanking Active TSS Enhancers ZNF genes & repeats Strong transcription Weak transcription Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases
3	nsv529726	chr10:96632494-97106315	Strong transcription Enhancers Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
4	nsv551963	chr10:96720262-96743943	Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:96718600-96737600	Weak transcription	Fetal Intestine Large	intestine
2	chr10:96730600-96738600	Strong transcription	Liver	Liver

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