Variant report

Variant	rs72818681
Chromosome Location	chr10:96792909-96792910
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 144 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:138)

rs_ID	r²[population]
rs10509681	0.83[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11188124	1.00[ASN][1000 genomes]
rs11188148	0.83[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11188153	0.83[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11188154	0.83[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11572064	0.83[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11572080	0.83[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11572082	0.83[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11572094	0.83[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11572107	0.83[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11572116	0.83[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11572128	0.83[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11572150	0.83[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11572168	0.83[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11572169	1.00[ASN][1000 genomes]
rs11572174	0.83[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11591385	0.83[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11592225	1.00[ASN][1000 genomes]
rs11593816	0.83[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11596254	1.00[ASN][1000 genomes]
rs11596290	1.00[ASN][1000 genomes]
rs11596296	1.00[ASN][1000 genomes]
rs11596943	1.00[ASN][1000 genomes]
rs11598823	0.83[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11599203	1.00[ASN][1000 genomes]
rs11599738	1.00[ASN][1000 genomes]
rs12761315	1.00[ASN][1000 genomes]
rs12762602	1.00[ASN][1000 genomes]
rs12762652	1.00[ASN][1000 genomes]
rs12763201	1.00[ASN][1000 genomes]
rs12763939	1.00[ASN][1000 genomes]
rs12774244	1.00[ASN][1000 genomes]
rs12777852	1.00[ASN][1000 genomes]
rs12779339	1.00[ASN][1000 genomes]
rs12780333	1.00[ASN][1000 genomes]
rs17442862	1.00[ASN][1000 genomes]
rs17443251	1.00[ASN][1000 genomes]
rs17452671	1.00[ASN][1000 genomes]
rs17452714	1.00[ASN][1000 genomes]
rs17523627	1.00[ASN][1000 genomes]
rs17524348	1.00[ASN][1000 genomes]
rs1799853	1.00[ASN][1000 genomes]
rs1934954	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1934966	1.00[ASN][1000 genomes]
rs2153629	1.00[ASN][1000 genomes]
rs2185570	1.00[ASN][1000 genomes]
rs2860968	1.00[ASN][1000 genomes]
rs34119978	1.00[ASN][1000 genomes]
rs34246390	1.00[ASN][1000 genomes]
rs34254643	1.00[ASN][1000 genomes]
rs34320910	1.00[ASN][1000 genomes]
rs34462937	1.00[ASN][1000 genomes]
rs34949438	1.00[ASN][1000 genomes]
rs35203700	1.00[ASN][1000 genomes]
rs35238981	1.00[ASN][1000 genomes]
rs35461306	1.00[ASN][1000 genomes]
rs35883122	1.00[ASN][1000 genomes]
rs35955220	1.00[ASN][1000 genomes]
rs35998772	1.00[ASN][1000 genomes]
rs36037322	1.00[ASN][1000 genomes]
rs36042065	1.00[ASN][1000 genomes]
rs36168663	1.00[ASN][1000 genomes]
rs3980257	1.00[ASN][1000 genomes]
rs41291560	1.00[ASN][1000 genomes]
rs4351748	1.00[ASN][1000 genomes]
rs45523137	1.00[ASN][1000 genomes]
rs4607998	1.00[ASN][1000 genomes]
rs483239	1.00[ASN][1000 genomes]
rs4917636	1.00[ASN][1000 genomes]
rs4918704	1.00[ASN][1000 genomes]
rs4918705	1.00[ASN][1000 genomes]
rs4918710	1.00[ASN][1000 genomes]
rs4918716	1.00[ASN][1000 genomes]
rs4918746	1.00[ASN][1000 genomes]
rs4918795	1.00[ASN][1000 genomes]
rs507728	1.00[ASN][1000 genomes]
rs55727865	1.00[ASN][1000 genomes]
rs55753924	0.83[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs56028148	0.83[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs56044736	1.00[ASN][1000 genomes]
rs56090603	1.00[ASN][1000 genomes]
rs56380192	1.00[ASN][1000 genomes]
rs56386142	1.00[ASN][1000 genomes]
rs56408997	0.83[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs570849	1.00[ASN][1000 genomes]
rs595924	1.00[ASN][1000 genomes]
rs601746	1.00[ASN][1000 genomes]
rs61886257	1.00[ASN][1000 genomes]
rs61886771	1.00[ASN][1000 genomes]
rs61886773	1.00[ASN][1000 genomes]
rs61886796	1.00[ASN][1000 genomes]
rs61886797	1.00[ASN][1000 genomes]
rs61886802	1.00[ASN][1000 genomes]
rs61888362	1.00[ASN][1000 genomes]
rs61888394	1.00[ASN][1000 genomes]
rs61888396	1.00[ASN][1000 genomes]
rs61888402	1.00[ASN][1000 genomes]
rs61888408	1.00[ASN][1000 genomes]
rs61888409	1.00[ASN][1000 genomes]
rs61888410	1.00[ASN][1000 genomes]
rs61888411	1.00[ASN][1000 genomes]
rs623544	1.00[ASN][1000 genomes]
rs639937	1.00[ASN][1000 genomes]
rs659309	1.00[ASN][1000 genomes]
rs66648066	1.00[ASN][1000 genomes]
rs66816038	1.00[ASN][1000 genomes]
rs670565	1.00[ASN][1000 genomes]
rs67728892	1.00[ASN][1000 genomes]
rs67737822	1.00[ASN][1000 genomes]
rs67851687	1.00[ASN][1000 genomes]
rs67918795	1.00[ASN][1000 genomes]
rs682349	1.00[ASN][1000 genomes]
rs684203	1.00[ASN][1000 genomes]
rs686705	1.00[ASN][1000 genomes]
rs701889	1.00[ASN][1000 genomes]
rs7082506	1.00[ASN][1000 genomes]
rs71482344	1.00[ASN][1000 genomes]
rs72816690	1.00[ASN][1000 genomes]
rs72816698	1.00[ASN][1000 genomes]
rs72816700	1.00[ASN][1000 genomes]
rs72816701	1.00[ASN][1000 genomes]
rs72818612	1.00[ASN][1000 genomes]
rs72818618	1.00[ASN][1000 genomes]
rs72818651	0.83[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72818652	0.83[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72818673	1.00[ASN][1000 genomes]
rs72818680	0.83[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs72820645	1.00[ASN][1000 genomes]
rs9332100	1.00[ASN][1000 genomes]
rs9332101	1.00[ASN][1000 genomes]
rs9332102	1.00[ASN][1000 genomes]
rs9332119	1.00[ASN][1000 genomes]
rs9332155	1.00[ASN][1000 genomes]
rs9332163	1.00[ASN][1000 genomes]
rs9332179	1.00[ASN][1000 genomes]
rs9332216	1.00[ASN][1000 genomes]
rs9332222	1.00[ASN][1000 genomes]
rs9332242	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv497859	chr10:96058024-97027747	Strong transcription Weak transcription Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	41 gene(s)	inside rSNPs	diseases
2	nsv1035409	chr10:96495177-96832057	Flanking Active TSS Enhancers ZNF genes & repeats Strong transcription Weak transcription Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases
3	nsv529726	chr10:96632494-97106315	Strong transcription Enhancers Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
4	nsv1050544	chr10:96766934-96814689	Enhancers Strong transcription Flanking Active TSS Weak transcription Genic enhancers Active TSS ZNF genes & repeats	TF binding region CpG island lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
5	nsv1044182	chr10:96783996-96814689	Weak transcription Enhancers Strong transcription ZNF genes & repeats Genic enhancers	TF binding region CpG island lncRNA miRNA target site	2 gene(s)	inside rSNPs	diseases
6	esv2761618	chr10:96784008-96814689	Enhancers Genic enhancers Strong transcription Weak transcription ZNF genes & repeats	TF binding region CpG island lncRNA miRNA target site	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:96791800-96795000	Weak transcription	Primary hematopoietic stem cells short term culture	blood

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