Variant report

Variant	rs9365818
Chromosome Location	chr6:165346909-165346910
allele	A/G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs1227992	0.84[EUR][1000 genomes]
rs1227993	0.84[EUR][1000 genomes]
rs1322188	0.92[EUR][1000 genomes]
rs58801628	0.81[EUR][1000 genomes]
rs61611447	0.80[EUR][1000 genomes]
rs6455971	0.92[EUR][1000 genomes]
rs6455973	0.92[EUR][1000 genomes]
rs6455974	0.92[EUR][1000 genomes]
rs6901342	0.86[EUR][1000 genomes]
rs6934301	0.95[EUR][1000 genomes]
rs7748837	0.80[EUR][1000 genomes]
rs7749037	0.80[EUR][1000 genomes]
rs911723	0.92[EUR][1000 genomes]
rs9365813	0.92[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv605232	chr6:164994771-165401154	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv886925	chr6:165319631-165705488	Enhancers Flanking Active TSS Weak transcription Genic enhancers Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	2 gene(s)	inside rSNPs	diseases
3	esv3323305	chr6:165342462-165347460	Flanking Active TSS Active TSS Enhancers Weak transcription ZNF genes & repeats	n/a	n/a	inside rSNPs	n/a
4	esv3391488	chr6:165343412-165346960	Enhancers ZNF genes & repeats Weak transcription Active TSS	n/a	n/a	inside rSNPs	n/a
5	esv3363161	chr6:165344587-165347135	Weak transcription ZNF genes & repeats	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:165343200-165347400	Weak transcription	Skeletal Muscle Female	skeletal muscle

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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