Variant report

Variant rs9370239
Chromosome Location chr6:53734792-53734793
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:30 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:53695000-53743200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr6:53709800-53762200 Weak transcription Primary B cells from cord blood blood
3 chr6:53719800-53747800 Weak transcription Primary T cells from cord blood blood
4 chr6:53720600-53741400 Weak transcription Dnd41 blood
5 chr6:53720800-53736600 Weak transcription Fetal Thymus thymus
6 chr6:53722000-53748200 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr6:53723400-53736800 Weak transcription Stomach Mucosa stomach
8 chr6:53727600-53751800 Weak transcription Thymus Thymus
9 chr6:53728400-53734800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr6:53728600-53738600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr6:53728600-53738600 Weak transcription NHEK skin
12 chr6:53729000-53734800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr6:53729000-53734800 Weak transcription HMEC breast
14 chr6:53729400-53736600 Weak transcription Fetal Intestine Small intestine
15 chr6:53729400-53738800 Weak transcription Pancreas Pancrea
16 chr6:53729400-53748000 Weak transcription HepG2 liver
17 chr6:53729800-53734800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr6:53730000-53734800 Weak transcription Brain Inferior Temporal Lobe brain
19 chr6:53730200-53748200 Weak transcription Rectal Smooth Muscle rectum
20 chr6:53730200-53758800 Weak transcription Brain Anterior Caudate brain
21 chr6:53730400-53737200 Weak transcription Pancreatic Islets Pancreatic Islet
22 chr6:53730400-53743800 Weak transcription Fetal Heart heart
23 chr6:53731400-53734800 Weak transcription Brain Substantia Nigra brain
24 chr6:53732000-53739400 Weak transcription Brain Hippocampus Middle brain
25 chr6:53732000-53747800 Weak transcription HSMMtube muscle
26 chr6:53732000-53760400 Weak transcription Aorta Aorta
27 chr6:53733800-53735000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr6:53734200-53735400 Enhancers HUVEC blood vessel
29 chr6:53734400-53734800 Enhancers Colon Smooth Muscle Colon
30 chr6:53734600-53741400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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