Variant report

Variant rs4321822
Chromosome Location chr6:53661238-53661239
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:53657400-53661400 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr6:53657600-53661400 Active TSS A549 lung
3 chr6:53657800-53661600 Active TSS Fetal Intestine Large intestine
4 chr6:53657800-53662400 Active TSS Pancreatic Islets Pancreatic Islet
5 chr6:53658000-53661400 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr6:53658000-53661400 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
7 chr6:53658000-53661400 Active TSS Aorta Aorta
8 chr6:53658000-53661400 Active TSS Esophagus oesophagus
9 chr6:53658000-53661600 Active TSS Brain Dorsolateral Prefrontal Cortex brain
10 chr6:53658000-53661600 Active TSS Fetal Intestine Small intestine
11 chr6:53658000-53662000 Active TSS Duodenum Smooth Muscle Duodenum
12 chr6:53658200-53661400 Active TSS Brain Substantia Nigra brain
13 chr6:53658200-53661400 Active TSS Gastric stomach
14 chr6:53658200-53661400 Active TSS Ovary ovary
15 chr6:53658400-53661400 Active TSS Stomach Mucosa stomach
16 chr6:53658400-53661400 Active TSS NHLF lung
17 chr6:53658600-53661800 Active TSS Brain Hippocampus Middle brain
18 chr6:53658800-53661400 Active TSS Colon Smooth Muscle Colon
19 chr6:53659000-53662000 Active TSS Brain Inferior Temporal Lobe brain
20 chr6:53659800-53661400 Flanking Active TSS Primary hematopoietic stem cells blood
21 chr6:53660000-53661400 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
22 chr6:53660000-53661400 Flanking Bivalent TSS/Enh Skeletal Muscle Female skeletal muscle
23 chr6:53660200-53661400 Flanking Active TSS Primary T cells from cord blood blood
24 chr6:53660200-53661400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr6:53660200-53661400 Flanking Bivalent TSS/Enh Fetal Muscle Leg muscle
26 chr6:53660200-53661600 Flanking Active TSS Primary T helper cells PMA-I stimulated --
27 chr6:53660200-53661600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr6:53660200-53661600 Flanking Active TSS Cortex derived primary cultured neurospheres brain
29 chr6:53660200-53661800 Flanking Active TSS Duodenum Mucosa Duodenum
30 chr6:53660400-53661400 Flanking Bivalent TSS/Enh hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
31 chr6:53660400-53661600 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr6:53660400-53661600 Flanking Active TSS Muscle Satellite Cultured Cells --
33 chr6:53660400-53662000 Flanking Active TSS HUVEC blood vessel
34 chr6:53660400-53663000 Flanking Active TSS Dnd41 blood
35 chr6:53660600-53661400 Bivalent/Poised TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
36 chr6:53660600-53661400 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
37 chr6:53660600-53661800 Flanking Active TSS Stomach Smooth Muscle stomach
38 chr6:53660800-53661400 Enhancers Primary T killer naive cells fromperipheralblood blood
39 chr6:53660800-53661400 Active TSS Brain Germinal Matrix brain
40 chr6:53660800-53661400 Active TSS Fetal Muscle Trunk muscle
41 chr6:53660800-53661600 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
42 chr6:53660800-53661600 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
43 chr6:53660800-53661600 Flanking Active TSS Rectal Mucosa Donor 31 rectum
44 chr6:53660800-53661600 Flanking Active TSS NH-A brain
45 chr6:53660800-53661800 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
46 chr6:53660800-53661800 Active TSS Placenta Placenta
47 chr6:53660800-53661800 Flanking Active TSS Hela-S3 cervix
48 chr6:53660800-53662800 Active TSS Rectal Smooth Muscle rectum
49 chr6:53660800-53663000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr6:53661000-53661400 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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