Variant report

Variant rs9370553
Chromosome Location chr6:56864084-56864085
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:24 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:56846400-56865800 Weak transcription Brain Cingulate Gyrus brain
2 chr6:56858600-56889400 Weak transcription Brain Hippocampus Middle brain
3 chr6:56862400-56865400 Weak transcription Brain Angular Gyrus brain
4 chr6:56863200-56864400 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
5 chr6:56863600-56864600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr6:56863800-56864200 ZNF genes & repeats H1 Cell Line embryonic stem cell
7 chr6:56863800-56864200 ZNF genes & repeats H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr6:56863800-56864200 ZNF genes & repeats Brain Inferior Temporal Lobe brain
9 chr6:56863800-56864400 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
10 chr6:56863800-56864400 ZNF genes & repeats Esophagus oesophagus
11 chr6:56863800-56864400 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
12 chr6:56863800-56864400 ZNF genes & repeats HMEC breast
13 chr6:56863800-56864400 ZNF genes & repeats NHEK skin
14 chr6:56863800-56864600 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr6:56863800-56864600 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr6:56863800-56864600 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
17 chr6:56863800-56864600 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr6:56863800-56864600 ZNF genes & repeats Foreskin Fibroblast Primary Cells skin02 Skin
19 chr6:56863800-56864600 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr6:56863800-56864600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr6:56863800-56864600 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
22 chr6:56863800-56864600 ZNF genes & repeats A549 lung
23 chr6:56863800-56864800 ZNF genes & repeats Foreskin Fibroblast Primary Cells skin01 Skin
24 chr6:56864000-56864600 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell

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