Variant report

Variant	rs9385168
Chromosome Location	chr6:120909880-120909881
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 28 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs1203069	1.00[ASN][1000 genomes]
rs1203071	1.00[ASN][1000 genomes]
rs1203072	1.00[ASN][1000 genomes]
rs1203078	1.00[ASN][1000 genomes]
rs1203089	1.00[ASN][1000 genomes]
rs1203092	0.95[ASN][1000 genomes]
rs2788665	0.86[ASN][1000 genomes]
rs28497554	1.00[ASN][1000 genomes]
rs62426588	0.89[ASN][1000 genomes]
rs6569151	0.85[ASN][1000 genomes]
rs9372612	0.89[ASN][1000 genomes]
rs9372613	0.89[ASN][1000 genomes]
rs9372622	1.00[ASN][1000 genomes]
rs9385162	0.89[ASN][1000 genomes]
rs9387838	0.89[ASN][1000 genomes]
rs9387854	1.00[ASN][1000 genomes]
rs9387855	0.95[ASN][1000 genomes]
rs9387856	1.00[ASN][1000 genomes]
rs9398587	1.00[ASN][1000 genomes]
rs9398588	1.00[ASN][1000 genomes]
rs9401285	0.89[ASN][1000 genomes]
rs9401291	0.89[ASN][1000 genomes]
rs9401306	0.95[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2753290	chr6:120309301-120979301	Enhancers Weak transcription Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases
2	esv2752474	chr6:120309301-120982301	Enhancers ZNF genes & repeats Weak transcription Active TSS Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS	TF binding region Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases
3	nsv428495	chr6:120861159-120954224	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
4	esv3396982	chr6:120900302-120916167	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
5	nsv981340	chr6:120909063-120917558	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:120909000-120910000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
2	chr6:120909800-120912000	Weak transcription	Brain Germinal Matrix	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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