Variant report

Variant	rs9386064
Chromosome Location	chr6:100705724-100705725
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr6:100635794..100638408-chr6:100704392..100706756,2	K562	blood:
2	chr6:100704664..100707778-chr6:100709218..100711307,3	K562	blood:
3	chr6:100704664..100707392-chr6:100709218..100711307,2	K562	blood:
4	chr6:100676458..100678188-chr6:100705698..100707425,2	MCF-7	breast:
5	chr6:100678985..100681308-chr6:100704669..100708291,4	K562	blood:

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs12175103	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1354685	0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2066947	0.92[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2073265	0.93[EUR][1000 genomes]
rs2224066	0.92[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2224067	0.92[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2841308	0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2841309	0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4280969	0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4374824	0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6940893	0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs8180616	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9376820	0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9399475	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9399482	0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9496920	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:100702400-100708800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr6:100703800-100706000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr6:100703800-100715600	Weak transcription	HSMM	muscle
4	chr6:100704200-100715600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr6:100704800-100705800	Enhancers	Dnd41	blood
6	chr6:100705200-100705800	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
7	chr6:100705600-100705800	Enhancers	HUVEC	blood vessel
8	chr6:100705600-100705800	Enhancers	Osteobl	bone
9	chr6:100705600-100706000	Bivalent Enhancer	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr6:100705600-100706200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
11	chr6:100705600-100706200	Active TSS	A549	lung
12	chr6:100705600-100706200	Flanking Active TSS	NH-A	brain
13	chr6:100705600-100706400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
14	chr6:100705600-100706400	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
15	chr6:100705600-100706400	Enhancers	HUES64 Cell Line	embryonic stem cell
16	chr6:100705600-100706400	Enhancers	iPS-18 Cell Line	embryonic stem cell
17	chr6:100705600-100706400	Flanking Active TSS	Muscle Satellite Cultured Cells	--
18	chr6:100705600-100706400	Enhancers	Cortex derived primary cultured neurospheres	brain
19	chr6:100705600-100706400	Flanking Active TSS	Pancreatic Islets	Pancreatic Islet
20	chr6:100705600-100706400	Flanking Active TSS	K562	blood
21	chr6:100705600-100706600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--

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