Variant report

Variant	rs9387164
Chromosome Location	chr6:113986796-113986797
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs12176307	0.84[AFR][1000 genomes]
rs4945964	0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4945965	0.99[AFR][1000 genomes];0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4945966	0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6922998	0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9374415	0.86[AFR][1000 genomes];0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9374416	0.95[AFR][1000 genomes];0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9374417	0.95[AFR][1000 genomes];0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9398360	0.91[AFR][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:113976000-113990800	Weak transcription	Psoas Muscle	Psoas
2	chr6:113982400-113993600	Weak transcription	Placenta	Placenta
3	chr6:113983000-113993800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr6:113984000-113989800	Weak transcription	Adipose Nuclei	Adipose
5	chr6:113984200-113993200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
6	chr6:113984600-113989400	Weak transcription	HepG2	liver
7	chr6:113984600-113993800	Weak transcription	Duodenum Mucosa	Duodenum
8	chr6:113985000-113990200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
9	chr6:113985600-113986800	Weak transcription	GM12878-XiMat	blood
10	chr6:113985600-113990200	Weak transcription	Fetal Stomach	stomach
11	chr6:113985600-113990800	Weak transcription	Ovary	ovary
12	chr6:113986000-113989400	Weak transcription	Fetal Lung	lung

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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