The 2.0 version of rSNPBase

Variant report

Variant rs9387609
Chromosome Location chr6:119241860-119241861
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:119216600-119243800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr6:119217000-119242200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr6:119218600-119247000 Strong transcription Fetal Thymus thymus
4 chr6:119219200-119254000 Strong transcription Monocytes-CD14+_RO01746 blood
5 chr6:119219200-119254400 Strong transcription Placenta Placenta
6 chr6:119219600-119253000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
7 chr6:119219600-119253800 Strong transcription Primary hematopoietic stem cells short term culture blood
8 chr6:119221200-119255800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr6:119221400-119246800 Strong transcription HUES48 Cell Line embryonic stem cell
10 chr6:119221600-119247800 Strong transcription iPS-20b Cell Line embryonic stem cell
11 chr6:119222000-119243200 Strong transcription HepG2 liver
12 chr6:119222000-119254000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
13 chr6:119222000-119254400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr6:119222000-119255200 Weak transcription Fetal Heart heart
15 chr6:119222200-119245400 Strong transcription iPS-18 Cell Line embryonic stem cell
16 chr6:119222200-119253400 Strong transcription Fetal Intestine Large intestine
17 chr6:119222400-119246600 Strong transcription Primary monocytes fromperipheralblood blood
18 chr6:119222400-119249600 Strong transcription Primary B cells from peripheral blood blood
19 chr6:119222600-119251400 Strong transcription Dnd41 blood
20 chr6:119222600-119253800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
21 chr6:119222600-119253800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr6:119224000-119254000 Strong transcription HUES64 Cell Line embryonic stem cell
23 chr6:119224200-119245600 Strong transcription Duodenum Smooth Muscle Duodenum
24 chr6:119224200-119246000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr6:119224200-119252800 Strong transcription Primary neutrophils fromperipheralblood blood
26 chr6:119224400-119245600 Strong transcription Rectal Mucosa Donor 31 rectum
27 chr6:119224600-119254000 Strong transcription Breast Myoepithelial Primary Cells Breast
28 chr6:119224800-119254800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
29 chr6:119226000-119255200 Weak transcription ES-I3 Cell Line embryonic stem cell
30 chr6:119227000-119254800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr6:119227400-119252000 Weak transcription Small Intestine intestine
32 chr6:119227400-119253800 Strong transcription Primary T helper cells fromperipheralblood blood
33 chr6:119227600-119242600 Weak transcription Stomach Mucosa stomach
34 chr6:119227600-119247400 Strong transcription Primary T cells fromperipheralblood blood
35 chr6:119227800-119254800 Weak transcription iPS-15b Cell Line embryonic stem cell
36 chr6:119228000-119253000 Strong transcription Primary T helper cells PMA-I stimulated --
37 chr6:119228200-119253400 Strong transcription Primary T regulatory cells fromperipheralblood blood
38 chr6:119231000-119243000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
39 chr6:119232800-119242400 Weak transcription Primary T killer naive cells fromperipheralblood blood
40 chr6:119232800-119246800 Strong transcription Fetal Muscle Leg muscle
41 chr6:119233200-119247000 Strong transcription Fetal Muscle Trunk muscle
42 chr6:119234800-119242800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
43 chr6:119235200-119243800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
44 chr6:119235600-119255200 Weak transcription Fetal Brain Male brain
45 chr6:119235600-119255400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
46 chr6:119236000-119249000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
47 chr6:119236000-119253400 Strong transcription Liver Liver
48 chr6:119236600-119254000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr6:119236600-119255200 Weak transcription Right Ventricle heart
50 chr6:119236800-119242200 Weak transcription Colonic Mucosa Colon

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Last update: Aug 31, 2015