Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:14703530..14706793-chr7:14707958..14711601,3	K562	blood:

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10279650	0.90[CEU][hapmap]
rs10279786	0.94[CEU][hapmap]
rs1357858	0.94[CEU][hapmap]
rs1357860	0.90[CEU][hapmap]
rs1404612	0.90[CEU][hapmap]
rs1464822	0.90[CEU][hapmap];0.81[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1525082	0.84[ASN][1000 genomes]
rs1525086	0.94[CEU][hapmap];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1568843	0.90[CEU][hapmap];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1568844	0.98[ASN][1000 genomes]
rs2204409	0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2358025	0.83[CEU][hapmap];0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2462567	0.97[ASN][1000 genomes]
rs4027159	0.92[ASN][1000 genomes]
rs4236282	0.90[CEU][hapmap];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4424153	0.84[ASN][1000 genomes]
rs6461117	0.83[ASN][1000 genomes]
rs7785131	0.94[CEU][hapmap];0.93[EUR][1000 genomes]
rs7793583	0.85[CEU][hapmap]
rs7801612	0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949033	chr7:14086106-14860323	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv1031041	chr7:14624127-14999201	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv538741	chr7:14624127-14999201	Enhancers Flanking Active TSS Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
4	nsv1015777	chr7:14661754-14730811	Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Active TSS Strong transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
5	esv3362199	chr7:14684761-14707777	ZNF genes & repeats Weak transcription Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:14704200-14736000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
2	chr7:14706400-14712000	Weak transcription	Cortex derived primary cultured neurospheres	brain

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