Variant report

Variant rs942684
Chromosome Location chr1:85319822-85319823
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:69 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:85289400-85330800 Weak transcription iPS-20b Cell Line embryonic stem cell
2 chr1:85313000-85332800 Weak transcription HUES64 Cell Line embryonic stem cell
3 chr1:85313400-85320400 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr1:85313600-85330600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr1:85313600-85357200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
6 chr1:85314000-85330400 Weak transcription Pancreas Pancrea
7 chr1:85314400-85320400 Weak transcription Left Ventricle heart
8 chr1:85314600-85328400 Weak transcription Breast Myoepithelial Primary Cells Breast
9 chr1:85315200-85322000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
10 chr1:85315600-85336400 Weak transcription Right Ventricle heart
11 chr1:85316200-85320800 Enhancers Placenta Placenta
12 chr1:85316600-85321600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr1:85317600-85320000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr1:85317600-85322200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
15 chr1:85319000-85320000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
16 chr1:85319000-85320400 Enhancers Primary T helper 17 cells PMA-I stimulated --
17 chr1:85319000-85320600 Enhancers Primary hematopoietic stem cells short term culture blood
18 chr1:85319000-85320600 Enhancers Placenta Amnion Placenta Amnion
19 chr1:85319000-85320800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
20 chr1:85319000-85320800 Enhancers Fetal Intestine Large intestine
21 chr1:85319000-85321200 Enhancers Primary monocytes fromperipheralblood blood
22 chr1:85319000-85321400 Enhancers Primary T helper cells PMA-I stimulated --
23 chr1:85319000-85321400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr1:85319000-85321400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr1:85319000-85321400 Enhancers HMEC breast
26 chr1:85319000-85321600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr1:85319000-85321600 Enhancers Hela-S3 cervix
28 chr1:85319000-85322000 Enhancers NHDF-Ad bronchial
29 chr1:85319200-85320000 Enhancers Colonic Mucosa Colon
30 chr1:85319200-85320000 Enhancers Sigmoid Colon Sigmoid Colon
31 chr1:85319200-85320400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr1:85319200-85320800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
33 chr1:85319200-85320800 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
34 chr1:85319200-85320800 Enhancers Esophagus oesophagus
35 chr1:85319200-85321000 Enhancers Fetal Intestine Small intestine
36 chr1:85319200-85321000 Enhancers NHLF lung
37 chr1:85319200-85321200 Enhancers Primary hematopoietic stem cells blood
38 chr1:85319200-85321200 Enhancers Monocytes-CD14+_RO01746 blood
39 chr1:85319400-85320800 Enhancers Primary T cells fromperipheralblood blood
40 chr1:85319400-85320800 Enhancers Rectal Mucosa Donor 31 rectum
41 chr1:85319400-85321000 Enhancers Primary T helper naive cells from peripheral blood blood
42 chr1:85319400-85321000 Enhancers Primary T helper cells fromperipheralblood blood
43 chr1:85319400-85321200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
44 chr1:85319400-85321200 Enhancers Primary T helper naive cells fromperipheralblood blood
45 chr1:85319400-85321200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
46 chr1:85319400-85321200 Enhancers Primary Natural Killer cells fromperipheralblood blood
47 chr1:85319400-85321400 Enhancers Primary T killer memory cells from peripheral blood blood
48 chr1:85319400-85321800 Enhancers GM12878-XiMat blood
49 chr1:85319400-85322000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr1:85319400-85322000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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