The 2.0 version of rSNPBase

Variant report

Variant rs9432620
Chromosome Location chr1:95405971-95405972
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:95394000-95415600 Weak transcription Breast Myoepithelial Primary Cells Breast
2 chr1:95395400-95410400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr1:95395600-95407000 Weak transcription Rectal Mucosa Donor 31 rectum
4 chr1:95395600-95412400 Weak transcription Colonic Mucosa Colon
5 chr1:95395600-95412400 Weak transcription Pancreas Pancrea
6 chr1:95395600-95416400 Weak transcription Brain Hippocampus Middle brain
7 chr1:95395800-95408600 Weak transcription Brain Cingulate Gyrus brain
8 chr1:95396000-95407800 Weak transcription Rectal Mucosa Donor 29 rectum
9 chr1:95399400-95412200 Weak transcription Stomach Smooth Muscle stomach
10 chr1:95399400-95412400 Weak transcription Fetal Stomach stomach
11 chr1:95399400-95415400 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr1:95399400-95418800 Weak transcription Ovary ovary
13 chr1:95402200-95406000 Weak transcription Cortex derived primary cultured neurospheres brain
14 chr1:95402400-95419400 Weak transcription H9 Cell Line embryonic stem cell
15 chr1:95402600-95412400 Weak transcription Stomach Mucosa stomach
16 chr1:95402600-95412600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr1:95402800-95407600 Weak transcription HepG2 liver
18 chr1:95402800-95412200 Weak transcription Fetal Heart heart
19 chr1:95402800-95415400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
20 chr1:95403000-95406200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr1:95403000-95406800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr1:95403000-95408600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr1:95403400-95406400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr1:95403600-95406200 Weak transcription NHEK skin
25 chr1:95403800-95406000 Enhancers HUES64 Cell Line embryonic stem cell
26 chr1:95404000-95407200 Weak transcription Liver Liver
27 chr1:95404200-95406200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr1:95404200-95406200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr1:95404200-95406800 Weak transcription ES-I3 Cell Line embryonic stem cell
30 chr1:95404200-95407400 Weak transcription HUES6 Cell Line embryonic stem cell
31 chr1:95404200-95407800 Weak transcription Duodenum Mucosa Duodenum
32 chr1:95404200-95410200 Weak transcription Gastric stomach
33 chr1:95404200-95412200 Weak transcription Fetal Muscle Leg muscle
34 chr1:95404200-95412400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
35 chr1:95404200-95412400 Weak transcription Right Atrium heart
36 chr1:95404200-95412400 Weak transcription HSMMtube muscle
37 chr1:95404200-95421400 Weak transcription Aorta Aorta
38 chr1:95404400-95411200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
39 chr1:95404400-95415200 Weak transcription Muscle Satellite Cultured Cells --
40 chr1:95405000-95406200 Weak transcription HSMM muscle
41 chr1:95405000-95412200 Weak transcription Duodenum Smooth Muscle Duodenum
42 chr1:95405000-95415600 Weak transcription NH-A brain
43 chr1:95405200-95407600 Weak transcription A549 lung
44 chr1:95405200-95407800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr1:95405200-95412400 Weak transcription Left Ventricle heart
46 chr1:95405800-95406000 Enhancers Fetal Kidney kidney
47 chr1:95405800-95406400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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Last update: Aug 31, 2015