Variant report

Variant	rs9432622
Chromosome Location	chr1:95410592-95410593
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs11590093	0.98[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs11800399	0.88[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs11807661	0.96[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs11808784	1.00[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs6704409	0.93[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9432619	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9432620	1.00[AFR][1000 genomes];0.85[EUR][1000 genomes]

No data

Chromatin state (count:35 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:95394000-95415600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
2	chr1:95395600-95412400	Weak transcription	Colonic Mucosa	Colon
3	chr1:95395600-95412400	Weak transcription	Pancreas	Pancrea
4	chr1:95395600-95416400	Weak transcription	Brain Hippocampus Middle	brain
5	chr1:95399400-95412200	Weak transcription	Stomach Smooth Muscle	stomach
6	chr1:95399400-95412400	Weak transcription	Fetal Stomach	stomach
7	chr1:95399400-95415400	Weak transcription	Sigmoid Colon	Sigmoid Colon
8	chr1:95399400-95418800	Weak transcription	Ovary	ovary
9	chr1:95402400-95419400	Weak transcription	H9 Cell Line	embryonic stem cell
10	chr1:95402600-95412400	Weak transcription	Stomach Mucosa	stomach
11	chr1:95402600-95412600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr1:95402800-95412200	Weak transcription	Fetal Heart	heart
13	chr1:95402800-95415400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
14	chr1:95404200-95412200	Weak transcription	Fetal Muscle Leg	muscle
15	chr1:95404200-95412400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
16	chr1:95404200-95412400	Weak transcription	Right Atrium	heart
17	chr1:95404200-95412400	Weak transcription	HSMMtube	muscle
18	chr1:95404200-95421400	Weak transcription	Aorta	Aorta
19	chr1:95404400-95411200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
20	chr1:95404400-95415200	Weak transcription	Muscle Satellite Cultured Cells	--
21	chr1:95405000-95412200	Weak transcription	Duodenum Smooth Muscle	Duodenum
22	chr1:95405000-95415600	Weak transcription	NH-A	brain
23	chr1:95405200-95412400	Weak transcription	Left Ventricle	heart
24	chr1:95406000-95419400	Weak transcription	Fetal Kidney	kidney
25	chr1:95406600-95412400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
26	chr1:95406600-95412400	Weak transcription	HSMM	muscle
27	chr1:95408400-95411000	Enhancers	Duodenum Mucosa	Duodenum
28	chr1:95408400-95412000	Weak transcription	Rectal Mucosa Donor 31	rectum
29	chr1:95408400-95420000	Weak transcription	Rectal Mucosa Donor 29	rectum
30	chr1:95408600-95412400	Weak transcription	Liver	Liver
31	chr1:95409200-95415200	Weak transcription	HepG2	liver
32	chr1:95409400-95411200	Weak transcription	Cortex derived primary cultured neurospheres	brain
33	chr1:95409800-95410600	Enhancers	Small Intestine	intestine
34	chr1:95410200-95410600	Enhancers	Gastric	stomach
35	chr1:95410400-95410600	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell

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