Variant report

Variant	rs9446311
Chromosome Location	chr6:71660233-71660234
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs12212650	0.83[EUR][1000 genomes]
rs1535288	0.84[CEU][hapmap];0.81[EUR][1000 genomes]
rs1574490	0.86[EUR][1000 genomes]
rs2255286	0.88[CEU][hapmap];0.82[EUR][1000 genomes]
rs2347629	0.84[CEU][hapmap]
rs2460695	0.91[CHB][hapmap]
rs2504739	0.88[CEU][hapmap];0.82[EUR][1000 genomes]
rs2504740	0.87[CHB][hapmap]
rs4707868	0.85[EUR][1000 genomes]
rs4707869	0.84[CEU][hapmap]
rs62420337	0.85[EUR][1000 genomes]
rs6914786	0.84[EUR][1000 genomes]
rs9294882	0.84[CEU][hapmap]
rs9446313	0.83[EUR][1000 genomes]
rs9455273	0.88[CEU][hapmap];0.86[EUR][1000 genomes]
rs9455274	0.84[CEU][hapmap];0.86[EUR][1000 genomes]
rs9455275	0.86[EUR][1000 genomes]
rs9455277	0.85[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv886148	chr6:71623253-71694742	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Weak transcription	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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