Variant report

Variant	rs4707868
Chromosome Location	chr6:71651039-71651040
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 25 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10945275	0.89[CHB][hapmap];0.86[ASN][1000 genomes]
rs12212650	0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1320315	0.94[CHB][hapmap];0.81[JPT][hapmap];0.91[ASN][1000 genomes]
rs1535288	0.82[YRI][hapmap];0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1574490	0.81[AFR][1000 genomes];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2255286	1.00[CHB][hapmap];0.89[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2347629	1.00[CHB][hapmap]
rs2460691	0.89[CHB][hapmap];0.88[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2474918	0.89[CHB][hapmap];0.87[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs2504735	0.94[CHB][hapmap];0.82[JPT][hapmap]
rs2504739	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs4707869	1.00[CHB][hapmap];0.82[JPT][hapmap];0.86[YRI][hapmap]
rs4707871	0.94[CHB][hapmap];0.83[JPT][hapmap];0.91[ASN][1000 genomes]
rs582908	0.89[CHB][hapmap]
rs62420337	0.80[AFR][1000 genomes];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs6900011	0.94[CHB][hapmap];0.81[JPT][hapmap];0.91[ASN][1000 genomes]
rs6914786	0.84[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7449748	0.94[CHB][hapmap];0.83[JPT][hapmap]
rs9294882	1.00[CHB][hapmap];0.82[JPT][hapmap];0.80[YRI][hapmap]
rs9446313	0.87[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs9455273	0.81[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs9455274	0.81[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs9455275	0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs9455277	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv886148	chr6:71623253-71694742	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Weak transcription	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:71650600-71651200	Enhancers	Pancreatic Islets	Pancreatic Islet

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