Variant report

(count:10 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	RUNX3	chr6:73855425-73855821	GM12878	blood:	n/a	n/a
2	MEF2A	chr6:73855382-73855792	GM12878	blood:	n/a	n/a
3	BATF	chr6:73855406-73855693	GM12878	blood:	n/a	n/a
4	ETS1	chr6:73855304-73855790	GM12878	blood:	n/a	n/a
5	SPI1	chr6:73855426-73855844	GM12891	blood:	n/a	n/a
6	SPI1	chr6:73855523-73855777	GM12878	blood:	n/a	n/a
7	BATF	chr6:73855444-73855746	GM12878	blood:	n/a	n/a
8	NFIC	chr6:73855427-73855707	GM12878	blood:	n/a	n/a
9	RUNX3	chr6:73855465-73855771	GM12878	blood:	n/a	n/a
10	ATF2	chr6:73855453-73855770	GM12878	blood:	n/a	n/a

No data

(count:5 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr6:73846488..73848334-chr6:73855218..73857477,2	K562	blood:
2	6:73855086-73857473..6:74160392-74184826	K562	blood:
3	6:73855086-73857473..6:74078047-74099067	K562	blood:
4	6:73855086-73857473..6:74099986-74112890	K562	blood:
5	6:73855086-73857473..6:74062967-74076046	GM12878	blood:

No data

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10498890	0.87[ASN][1000 genomes]
rs11962533	0.98[AFR][1000 genomes];0.91[AMR][1000 genomes]
rs1573057	0.86[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs16883380	0.86[ASN][1000 genomes]
rs16883387	0.87[ASN][1000 genomes]
rs2051024	0.87[EUR][1000 genomes]
rs58439359	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs59347822	0.87[ASN][1000 genomes]
rs6906616	0.98[AFR][1000 genomes];0.91[AMR][1000 genomes]
rs6906825	0.98[AFR][1000 genomes];0.91[AMR][1000 genomes]
rs6907569	0.98[AFR][1000 genomes];0.91[AMR][1000 genomes]
rs6912022	0.97[AFR][1000 genomes];0.91[AMR][1000 genomes]
rs6930212	0.87[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs7744354	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7744386	0.98[AFR][1000 genomes];0.91[AMR][1000 genomes]
rs7744394	0.98[AFR][1000 genomes];0.91[AMR][1000 genomes]
rs7764373	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7764571	0.81[AMR][1000 genomes]
rs9442895	0.98[AFR][1000 genomes];0.91[AMR][1000 genomes]
rs9446852	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9446853	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9446856	0.96[AFR][1000 genomes];0.91[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3410973	chr6:73716033-74419545	Active TSS Bivalent Enhancer Flanking Active TSS Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	191 gene(s)	inside rSNPs	diseases
2	nsv519218	chr6:73845299-73862856	Weak transcription Enhancers Strong transcription ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:73844400-73867000	Weak transcription	Primary hematopoietic stem cells	blood
2	chr6:73844600-73865200	Weak transcription	Primary T cells from cord blood	blood
3	chr6:73844800-73866400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
4	chr6:73846000-73866400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
5	chr6:73846400-73879200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr6:73853000-73856200	Strong transcription	Primary hematopoietic stem cells short term culture	blood
7	chr6:73854400-73856600	Strong transcription	Primary B cells from cord blood	blood
8	chr6:73854600-73867200	Weak transcription	Aorta	Aorta
9	chr6:73855400-73856200	Enhancers	GM12878-XiMat	blood

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