Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs1002783	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs13203503	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1361094	0.83[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs1556778	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2016754	0.80[AFR][1000 genomes];0.84[AMR][1000 genomes]
rs2027245	0.83[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs2105123	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs35213691	0.89[ASN][1000 genomes]
rs4706934	0.86[ASN][1000 genomes]
rs6454253	0.99[ASN][1000 genomes]
rs6454254	0.87[ASN][1000 genomes]
rs6916279	0.86[ASN][1000 genomes]
rs6934271	0.80[AFR][1000 genomes];0.83[ASN][1000 genomes]
rs7753505	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7754927	0.89[ASN][1000 genomes]
rs9294244	0.91[ASN][1000 genomes]
rs9341911	0.86[ASN][1000 genomes]
rs9443955	0.90[ASN][1000 genomes]
rs9443961	0.87[ASN][1000 genomes]
rs9449409	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9449411	0.92[AFR][1000 genomes];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9449427	0.84[ASN][1000 genomes]
rs945854	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1021464	chr6:82738920-82876526	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Genic enhancers Bivalent Enhancer	Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv830713	chr6:82761201-82953570	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases
3	nsv830715	chr6:82806657-82956327	Weak transcription Strong transcription Flanking Active TSS Genic enhancers Enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:82820000-82820600	ZNF genes & repeats	Fetal Heart	heart

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