The 2.0 version of rSNPBase

Variant report

Variant rs9461575
Chromosome Location chr6:30149689-30149690
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:30139000-30152000 Weak transcription Liver Liver
2 chr6:30145000-30173800 Weak transcription Right Atrium heart
3 chr6:30147600-30150800 Weak transcription HepG2 liver
4 chr6:30147800-30152000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
5 chr6:30148000-30151600 Weak transcription Primary T cells from cord blood blood
6 chr6:30148000-30152000 Weak transcription Primary T helper cells PMA-I stimulated --
7 chr6:30148000-30152000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
8 chr6:30148000-30152200 Weak transcription Primary T helper cells fromperipheralblood blood
9 chr6:30148000-30152200 Weak transcription Primary T regulatory cells fromperipheralblood blood
10 chr6:30148000-30152600 Weak transcription Muscle Satellite Cultured Cells --
11 chr6:30148000-30155000 Weak transcription Primary T killer naive cells fromperipheralblood blood
12 chr6:30148000-30173000 Weak transcription Fetal Heart heart
13 chr6:30148200-30152000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
14 chr6:30148200-30152400 Weak transcription Primary hematopoietic stem cells short term culture blood
15 chr6:30148200-30154800 Weak transcription Primary T helper naive cells from peripheral blood blood
16 chr6:30148400-30154000 Weak transcription HUVEC blood vessel
17 chr6:30148800-30152000 Weak transcription Brain Angular Gyrus brain
18 chr6:30148800-30152200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr6:30149000-30149800 ZNF genes & repeats Pancreas Pancrea
20 chr6:30149000-30150000 ZNF genes & repeats Fetal Intestine Small intestine
21 chr6:30149000-30151800 Weak transcription Brain Substantia Nigra brain
22 chr6:30149000-30152000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr6:30149000-30152200 Weak transcription Primary B cells from cord blood blood
24 chr6:30149000-30152400 Weak transcription Placenta Amnion Placenta Amnion
25 chr6:30149000-30152800 Weak transcription Fetal Brain Male brain
26 chr6:30149000-30156400 Weak transcription Primary T killer memory cells from peripheral blood blood
27 chr6:30149200-30149800 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr6:30149200-30149800 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
29 chr6:30149200-30149800 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
30 chr6:30149200-30150000 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin01 Skin
31 chr6:30149200-30150000 Active TSS Spleen Spleen
32 chr6:30149200-30152200 Weak transcription Primary B cells from peripheral blood blood
33 chr6:30149200-30152200 Weak transcription Stomach Smooth Muscle stomach
34 chr6:30149200-30152400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
35 chr6:30149200-30152600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr6:30149200-30152600 Weak transcription HMEC breast
37 chr6:30149200-30157400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
38 chr6:30149400-30151800 Weak transcription Brain Cingulate Gyrus brain
39 chr6:30149400-30152000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr6:30149400-30152200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr6:30149400-30152400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr6:30149400-30152400 Weak transcription Esophagus oesophagus
43 chr6:30149400-30152600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
44 chr6:30149400-30152600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr6:30149400-30152600 Weak transcription Left Ventricle heart
46 chr6:30149400-30152600 Weak transcription Ovary ovary
47 chr6:30149400-30152800 Weak transcription iPS-18 Cell Line embryonic stem cell
48 chr6:30149400-30153200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
49 chr6:30149400-30153400 Weak transcription A549 lung
50 chr6:30149600-30149800 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin01 Skin

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Last update: Aug 31, 2015