Variant report
Variant | rs9464954 |
---|---|
Chromosome Location | chr6:16872149-16872150 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:3)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
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(count:3 , 50 per page) page:
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rs_ID | r2[population] |
---|---|
rs10214621 | 0.86[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs10214623 | 0.86[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs10214624 | 1.00[AMR][1000 genomes] |
rs10214782 | 0.86[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs1240832 | 1.00[EUR][1000 genomes] |
rs1240836 | 1.00[EUR][1000 genomes] |
rs1240837 | 1.00[EUR][1000 genomes] |
rs1240838 | 1.00[EUR][1000 genomes] |
rs1240840 | 1.00[EUR][1000 genomes] |
rs1776473 | 1.00[EUR][1000 genomes] |
rs2759210 | 1.00[EUR][1000 genomes] |
rs2797806 | 1.00[EUR][1000 genomes] |
rs41390248 | 1.00[EUR][1000 genomes] |
rs6934167 | 0.82[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs73725249 | 0.86[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs73725253 | 0.82[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs73725267 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs9464946 | 0.82[AFR][1000 genomes] |
rs9464947 | 0.86[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs9464949 | 0.82[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs9477231 | 1.00[AMR][1000 genomes] |
rs9477236 | 0.86[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs9477240 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | esv1838885 | chr6:16866948-16885765 | Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats | Chromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
2 | esv1837694 | chr6:16866948-16885869 | Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Bivalent Enhancer | Chromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
3 | esv1842967 | chr6:16866948-16885869 | Enhancers Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Weak transcription | Chromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr6:16871200-16873000 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
2 | chr6:16871800-16872800 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |