The 2.0 version of rSNPBase

Variant report

Variant rs9470260
Chromosome Location chr6:36337763-36337764
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:36326800-36354000 Weak transcription Small Intestine intestine
2 chr6:36327000-36354000 Weak transcription Right Atrium heart
3 chr6:36328400-36338200 Weak transcription Rectal Mucosa Donor 29 rectum
4 chr6:36328400-36338800 Weak transcription Esophagus oesophagus
5 chr6:36328400-36341400 Weak transcription Brain Anterior Caudate brain
6 chr6:36328400-36345600 Weak transcription Primary T regulatory cells fromperipheralblood blood
7 chr6:36328400-36351200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
8 chr6:36328400-36353400 Weak transcription Rectal Mucosa Donor 31 rectum
9 chr6:36328600-36342800 Weak transcription Ovary ovary
10 chr6:36328800-36353600 Weak transcription Brain Hippocampus Middle brain
11 chr6:36331400-36338800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
12 chr6:36333200-36338800 Weak transcription Spleen Spleen
13 chr6:36333200-36339000 Weak transcription Lung lung
14 chr6:36333200-36353800 Weak transcription Pancreas Pancrea
15 chr6:36333800-36353600 Weak transcription Stomach Mucosa stomach
16 chr6:36334400-36345600 Strong transcription Fetal Intestine Small intestine
17 chr6:36334600-36344200 Weak transcription Fetal Intestine Large intestine
18 chr6:36334600-36351000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
19 chr6:36335000-36342000 Weak transcription Colonic Mucosa Colon
20 chr6:36335000-36343400 Weak transcription GM12878-XiMat blood
21 chr6:36335200-36338800 Enhancers Primary monocytes fromperipheralblood blood
22 chr6:36335200-36339200 Strong transcription Duodenum Mucosa Duodenum
23 chr6:36336200-36338600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr6:36336400-36337800 Flanking Active TSS Primary neutrophils fromperipheralblood blood
25 chr6:36336400-36338000 Enhancers HSMMtube muscle
26 chr6:36336400-36338600 Enhancers Osteobl bone
27 chr6:36336600-36338000 Enhancers Placenta Placenta
28 chr6:36336600-36338000 Enhancers HSMM muscle
29 chr6:36336600-36338200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
30 chr6:36336800-36337800 Enhancers ES-I3 Cell Line embryonic stem cell
31 chr6:36336800-36338000 Flanking Active TSS Monocytes-CD14+_RO01746 blood
32 chr6:36336800-36338200 Enhancers Primary hematopoietic stem cells short term culture blood
33 chr6:36336800-36343800 Weak transcription Gastric stomach
34 chr6:36337000-36337800 Enhancers NH-A brain
35 chr6:36337000-36338000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr6:36337000-36338000 Enhancers HMEC breast
37 chr6:36337000-36338000 Enhancers NHDF-Ad bronchial
38 chr6:36337000-36338200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr6:36337000-36338200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr6:36337000-36345400 Weak transcription Aorta Aorta
41 chr6:36337200-36339000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
42 chr6:36337200-36348600 Weak transcription Sigmoid Colon Sigmoid Colon
43 chr6:36337400-36337800 Flanking Active TSS Primary B cells from cord blood blood
44 chr6:36337400-36338000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr6:36337400-36341200 Weak transcription H1 Cell Line embryonic stem cell
46 chr6:36337400-36341400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr6:36337400-36341800 Weak transcription Fetal Thymus thymus

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Last update: Aug 31, 2015